C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ets variant 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000159334 Etv1-002 ENSMUSG00000004151 10090 + 12:38783509-38868203 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaENSMUST00000159334
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000159334 0.242±0.05 2.530±0.93 0.261±0.00 1.535±0.52 0.352±0.16 0.557±0.40 0.836±0.19 0.084±0.04 1.108±0.00 0.084±0.00 0.328±0.32 0.036±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007L8 CIL_0007L8_0002 UCNEbase 12:38397629-39342373

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000981 IBA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0003700 TAS sequence-specific DNA binding transcription factor activity
GO:0005634 IBA nucleus
GO:0006357 IBA regulation of transcription from RNA polymerase II promoter
GO:0006366 IBA transcription from RNA polymerase II promoter
GO:0007411 IMP axon guidance
GO:0007517 IMP muscle organ development
GO:0007638 IMP mechanosensory behavior
GO:0043565 IEA sequence-specific DNA binding
GO:0045893 IDA positive regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000242066 ETV1-201 protein_coding Homo_sapiens 0 3291
ENST00000399357 ETV1-202 protein_coding Homo_sapiens 0 2813
ENST00000403527 ETV1-008 protein_coding Homo_sapiens 0 3788
ENST00000403685 ETV1-003 protein_coding Homo_sapiens 0 1770
ENST00000405192 ETV1-005 protein_coding Homo_sapiens 0 2298
ENST00000405218 ETV1-004 protein_coding Homo_sapiens 0 3389
ENST00000405358 ETV1-007 protein_coding Homo_sapiens 0 3389
ENST00000420159 ETV1-203 protein_coding Homo_sapiens 0 3291
ENST00000421381 ETV1-011 protein_coding Homo_sapiens 0 307
ENST00000430479 ETV1-001 protein_coding Homo_sapiens 0 3389
ENST00000431887 ETV1-012 protein_coding Homo_sapiens 4.06377e-44 182
ENST00000438956 ETV1-009 protein_coding Homo_sapiens 0 1208
ENST00000443137 ETV1-002 nonsense_mediated_decay Homo_sapiens 0 1181
ENST00000443608 ETV1-020 protein_coding Homo_sapiens 0 699
ENST00000460438 ETV1-019 retained_intron Homo_sapiens 5e-19 99
ENST00000472931 ETV1-010 retained_intron Homo_sapiens 0 1424
ENST00000476355 ETV1-016 retained_intron Homo_sapiens 0 577
ENST00000476720 ETV1-022 processed_transcript Homo_sapiens 0 1081
ENST00000483075 ETV1-018 processed_transcript Homo_sapiens 5e-19 99
ENST00000493831 ETV1-021 retained_intron Homo_sapiens 0 250
ENST00000497115 ETV1-017 processed_transcript Homo_sapiens 0 760

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