C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: lysophosphatidylcholine acyltransferase 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000004270 Lpcat3 10090 + 6:124663027-124704418 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000004381 Lpcat3-001 124663027-124704418 protein_coding
  ENSMUST00000128721 Lpcat3-004 124663172-124702290 processed_transcript
  ENSMUST00000130020 Lpcat3-008 124702755-124703928 processed_transcript
  ENSMUST00000133797 Lpcat3-005 124663215-124700560 retained_intron
  ENSMUST00000135516 Lpcat3-002 124663027-124704370 nonsense_mediated_decay
  ENSMUST00000141069 Lpcat3-003 124663181-124699501 processed_transcript
  ENSMUST00000141546 Lpcat3-006 124701419-124702613 processed_transcript
  ENSMUST00000150597 Lpcat3-009 124703005-124704017 processed_transcript
  ENSMUST00000152176 Lpcat3-007 124702257-124703058 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000004381ENSMUST00000128721
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000004381 59.061±9.68 59.361±8.69 32.286±3.27 9.235±5.32 42.447±9.09 49.808±10.05 18.090±1.88 85.062±15.47 56.473±15.40 41.113±0.87 8.239±0.69 54.323±17.21 48.679±34.42 104.134±49.93
ENSMUST00000128721 N/A N/A N/A 6.504±0.00 N/A N/A N/A N/A N/A N/A N/A 45.055±0.00 62.250±19.70 26.221±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005783 IEA endoplasmic reticulum
GO:0008654 IEA phospholipid biosynthetic process
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0047184 IEA 1-acylglycerophosphocholine O-acyltransferase activity
GO:0097006 IMP regulation of plasma lipoprotein particle levels

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075178 lpcat3 lysophosphatidylcholine acyltransferase 3 protein_coding Danio_rerio
ENSG00000111684 LPCAT3 lysophosphatidylcholine acyltransferase 3 protein_coding Homo_sapiens

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