C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: lysophosphatidylcholine acyltransferase 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000135516 Lpcat3-002 ENSMUSG00000004270 10090 + 6:124663027-124704370 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0097006 IMP regulation of plasma lipoprotein particle levels

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261407 LPCAT3-001 protein_coding Homo_sapiens 0 1315
ENST00000535021 LPCAT3-011 processed_transcript Homo_sapiens 0 556
ENST00000535479 LPCAT3-003 nonsense_mediated_decay Homo_sapiens 0 723
ENST00000536797 LPCAT3-004 nonsense_mediated_decay Homo_sapiens 0 549
ENST00000536971 LPCAT3-009 processed_transcript Homo_sapiens 1e-24 117
ENST00000537179 LPCAT3-007 retained_intron Homo_sapiens 0 309
ENST00000538910 LPCAT3-008 nonsense_mediated_decay Homo_sapiens 0 366
ENST00000540060 LPCAT3-010 processed_transcript Homo_sapiens 0 263
ENST00000540090 LPCAT3-006 nonsense_mediated_decay Homo_sapiens 0 850
ENST00000543794 LPCAT3-005 nonsense_mediated_decay Homo_sapiens 0 776
ENST00000545459 LPCAT3-013 processed_transcript Homo_sapiens 0 281
ENST00000599672 EMG1-001 protein_coding Homo_sapiens 0 342
ENST00000620843 LPCAT3-014 processed_transcript Homo_sapiens 0 237
ENST00000622221 RP1-66H9.1-001 unprocessed_pseudogene Homo_sapiens 0 233

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