C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: myosin IXb
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000004677 Myo9b 10090 + 8:71272714-71360712 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000071935 Myo9b-201 71272714-71360712 protein_coding
  ENSMUST00000168839 Myo9b-202 71272714-71360712 protein_coding
  ENSMUST00000170242 Myo9b-203 71272714-71360712 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000071935ENSMUST00000168839ENSMUST00000170242
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000071935 4.590±1.29 2.026±0.31 2.247±0.51 3.647±0.89 4.516±0.92 3.326±0.87 1.818±0.44 1.615±0.31 1.460±0.65 5.918±0.66 0.469±0.19 5.480±1.84 3.374±1.89 1.372±0.45
ENSMUST00000168839 N/A 1.498±0.00 N/A N/A 2.938±0.00 N/A N/A 0.620±0.01 0.725±0.27 N/A N/A 2.012±0.00 N/A 1.064±0.18
ENSMUST00000170242 3.624±2.00 6.433±0.76 3.376±0.67 4.947±2.93 8.772±2.01 6.526±2.15 1.859±0.38 1.408±0.62 1.582±0.57 7.584±0.56 0.701±0.22 5.967±2.56 3.202±1.14 1.329±0.32

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006GM CIL_0006GM_0002 CGP 8:71248561-71360712
CIL_0006GE CIL_0006GE_0002 CGP 8:71272714-71369732

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000146 IDA microfilament motor activity
GO:0001726 IDA ruffle
GO:0002548 IMP monocyte chemotaxis
GO:0003779 IEA actin binding
GO:0005096 IEA GTPase activator activity
GO:0005100 IDA Rho GTPase activator activity
GO:0005516 IEA calmodulin binding
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0005884 IEA actin filament
GO:0005938 IEA cell cortex
GO:0006200 IEA ATP catabolic process
GO:0007266 IMP Rho protein signal transduction
GO:0008152 IEA metabolic process
GO:0008270 IEA zinc ion binding
GO:0016020 IEA membrane
GO:0016459 IEA myosin complex
GO:0016887 IEA ATPase activity
GO:0030010 IMP establishment of cell polarity
GO:0030027 IDA lamellipodium
GO:0030898 IEA actin-dependent ATPase activity
GO:0031941 IEA filamentous actin
GO:0032321 IDA positive regulation of Rho GTPase activity
GO:0032433 IDA filopodium tip
GO:0043008 IEA ATP-dependent protein binding
GO:0043531 IEA ADP binding
GO:0046872 IEA metal ion binding
GO:0048246 IMP macrophage chemotaxis
GO:0048471 IEA perinuclear region of cytoplasm
GO:0051015 IEA actin filament binding
GO:0072673 IMP lamellipodium morphogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074413 MYO9B (1 of 3) myosin IXB protein_coding Danio_rerio
ENSDARG00000077410 myo9b myosin IXb protein_coding Danio_rerio
ENSDARG00000078313 MYO9B (3 of 3) myosin IXB protein_coding Danio_rerio
ENSG00000099331 MYO9B myosin IXB protein_coding Homo_sapiens

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