C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006GE_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000099331-ENSG00000053501 CGP 9606 19:17075781-17219829
GeneTranscriptPositionBiotype
ENSG00000053501 (USE1)
unconventional SNARE in the ER 1 homolog (S. cerevisiae) 		ENST00000263897 (USE1-004) 17215359-17219829 protein_coding
ENST00000445667 (USE1-201) 17215398-17219829 protein_coding
ENST00000593597 (USE1-008) 17215720-17219640 protein_coding
ENST00000594399 (USE1-009) 17215829-17217670 retained_intron
ENST00000594724 (USE1-007) 17215398-17219819 nonsense_mediated_decay
ENST00000595101 (USE1-002) 17215388-17218826 protein_coding
ENST00000596136 (USE1-001) 17215390-17219829 protein_coding
ENST00000600970 (USE1-003) 17215375-17219829 nonsense_mediated_decay
ENST00000601592 (USE1-006) 17215392-17217489 retained_intron
ENST00000601662 (USE1-005) 17215346-17217617 nonsense_mediated_decay
ENSG00000099331 (MYO9B)
myosin IXB 		ENST00000397274 (MYO9B-201) 17101656-17213294 protein_coding
ENST00000593411 (MYO9B-006) 17102182-17103789 processed_transcript
ENST00000593533 (MYO9B-004) 17198118-17206828 retained_intron
ENST00000594824 (MYO9B-002) 17075786-17213284 protein_coding
ENST00000594971 (MYO9B-007) 17172375-17184898 protein_coding
ENST00000595618 (MYO9B-001) 17075781-17213295 protein_coding
ENST00000595641 (MYO9B-003) 17101718-17212099 protein_coding
ENST00000596942 (MYO9B-015) 17206689-17211744 protein_coding
ENST00000597073 (MYO9B-005) 17206774-17213284 protein_coding
ENST00000597572 (MYO9B-017) 17210443-17211900 retained_intron
ENST00000597881 (MYO9B-018) 17210591-17211940 retained_intron
ENST00000598101 (MYO9B-008) 17172813-17184002 retained_intron
ENST00000598419 (MYO9B-016) 17207213-17214537 protein_coding
ENST00000598464 (MYO9B-011) 17183737-17184955 retained_intron
ENST00000599420 (MYO9B-013) 17202129-17206359 retained_intron
ENST00000601490 (MYO9B-012) 17184511-17186000 retained_intron
ENST00000601749 (MYO9B-010) 17180645-17187939 retained_intron
ENST00000602158 (MYO9B-014) 17202870-17206133 nonsense_mediated_decay
ENST00000602177 (MYO9B-009) 17172924-17188005 protein_coding
ENSG00000269066 (CTD-2528A14.5)
 ENST00000597045 (CTD-2528A14.5-001) 17095418-17099307 antisense
ENSG00000269836 (CTD-3032J10.4)
 ENST00000594678 (CTD-3032J10.4-001) 17177511-17178476 antisense
CIL_0006GE_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000004677-ENSMUSG00000002395 CGP 10090 8:71272714-71369732
GeneTranscriptPositionBiotype
ENSMUSG00000002395 (Use1)
unconventional SNARE in the ER 1 homolog (S. cerevisiae) 		ENSMUST00000019169 (Use1-001) 71367217-71369732 protein_coding
ENSMUST00000110053 (Use1-201) 71366848-71369729 protein_coding
ENSMUST00000110054 (Use1-002) 71366942-71369732 protein_coding
ENSMUST00000127517 (Use1-011) 71367641-71368214 retained_intron
ENSMUST00000136368 (Use1-007) 71367243-71368998 retained_intron
ENSMUST00000137137 (Use1-009) 71368792-71369671 retained_intron
ENSMUST00000139541 (Use1-010) 71367005-71367806 protein_coding
ENSMUST00000140236 (Use1-005) 71367780-71369732 retained_intron
ENSMUST00000142685 (Use1-008) 71367384-71368685 retained_intron
ENSMUST00000143657 (Use1-004) 71367217-71369732 retained_intron
ENSMUST00000146221 (Use1-006) 71367243-71368831 retained_intron
ENSMUST00000154550 (Use1-003) 71367217-71369732 retained_intron
ENSMUSG00000004677 (Myo9b)
myosin IXb 		ENSMUST00000071935 (Myo9b-201) 71272714-71360712 protein_coding
ENSMUST00000168839 (Myo9b-202) 71272714-71360712 protein_coding
ENSMUST00000170242 (Myo9b-203) 71272714-71360712 protein_coding
ENSMUSG00000035439 (Haus8)
4HAUS augmin-like complex, subunit 8 		ENSMUST00000035960 (Haus8-001) 71251125-71272934 protein_coding
ENSMUST00000110071 (Haus8-002) 71251125-71272376 protein_coding
ENSMUST00000123495 (Haus8-003) 71248561-71272460 nonsense_mediated_decay
ENSMUST00000128833 (Haus8-006) 71260227-71272358 processed_transcript
ENSMUST00000129455 (Haus8-007) 71256038-71256653 retained_intron
ENSMUST00000134361 (Haus8-004) 71256065-71272478 processed_transcript
ENSMUST00000144726 (Haus8-005) 71257038-71272442 retained_intron
ENSMUST00000157039 (Haus8-008) 71255443-71272460 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006GE_0001ENSG00000053501ENST00000263897ENST00000445667ENST00000593597ENST00000594724ENST00000595101ENST00000600970ENST00000601592ENST00000601662ENSG00000099331ENST00000397274ENST00000595618ENST00000595641ENST00000597073ENSG00000269066ENST00000597045ENSG00000269836ENST00000594678CIL_0006GE_0002ENSMUSG00000002395ENSMUST00000019169ENSMUST00000110054ENSMUST00000137137ENSMUST00000140236ENSMUST00000142685ENSMUST00000143657ENSMUST00000154550ENSMUSG00000004677ENSMUST00000071935ENSMUST00000168839ENSMUST00000170242ENSMUSG00000035439ENSMUST00000035960ENSMUST00000110071
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000053501 ENST00000263897 9.401±0.00 12.639±0.00 0.529±0.00 7.541±5.46 14.649±0.00 7.113±5.65 5.919±5.41 7.299±4.30 10.509±0.00 5.567±2.93 14.634±0.00 22.287±13.15 21.301±2.26 11.955±4.41
ENST00000445667 N/A N/A N/A N/A N/A N/A N/A N/A 0.272±0.00 N/A N/A 0.146±0.00 N/A N/A
ENST00000593597 N/A N/A N/A N/A 4.628±3.10 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000594399 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000594724 4.567±0.00 15.358±0.00 0.258±0.00 11.444±5.40 8.372±5.57 6.366±5.24 3.752±0.00 8.279±0.00 7.628±6.64 2.022±1.52 18.634±0.00 N/A N/A 13.953±0.00
ENST00000595101 N/A 2.010±0.00 N/A N/A N/A N/A N/A 0.451±0.00 0.110±0.00 N/A N/A N/A N/A 1.226±0.01
ENST00000596136 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000600970 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.065±0.00 N/A N/A N/A N/A
ENST00000601592 N/A N/A 0.329±0.00 N/A N/A N/A 0.200±0.00 N/A 1.599±0.00 N/A 0.848±0.00 1.007±0.00 N/A N/A
ENST00000601662 N/A N/A N/A N/A N/A N/A 0.215±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000099331 ENST00000397274 5.920±0.00 11.392±0.00 N/A 2.507±0.00 0.726±0.00 N/A 2.753±0.00 4.053±0.00 N/A N/A 0.840±0.33 4.287±1.05 9.527±0.87 6.928±0.93
ENST00000593411 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000593533 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000594824 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000594971 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000595618 N/A N/A N/A N/A 1.869±0.00 2.493±0.00 3.391±0.00 N/A 1.980±0.76 7.624±0.00 N/A 3.427±0.00 N/A N/A
ENST00000595641 4.712±0.00 4.925±0.00 N/A 1.730±1.37 1.936±0.36 2.387±0.55 N/A 1.294±0.00 1.114±0.00 2.795±1.45 1.256±0.00 4.803±1.06 2.954±0.00 4.979±1.54
ENST00000596942 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000597073 7.338±0.00 21.345±0.00 N/A 5.542±0.00 6.848±0.00 6.165±0.00 N/A 6.220±0.00 2.867±0.00 N/A 3.663±0.00 7.675±1.24 N/A 13.431±0.00
ENST00000597572 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000597881 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000598101 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000598419 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000598464 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000599420 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000601490 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000601749 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602158 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602177 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000269066 ENST00000597045 2.292±0.00 4.098±0.00 N/A 3.417±0.00 4.738±0.00 2.412±0.00 1.677±0.00 2.223±0.00 1.515±0.00 2.859±0.00 1.382±0.00 1.166±0.25 0.377±0.00 2.007±0.78
ENSG00000269836 ENST00000594678 N/A 1.060±0.00 N/A N/A N/A N/A N/A N/A 0.530±0.00 N/A N/A 0.916±0.00 N/A 0.883±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000002395 ENSMUST00000019169 38.942±2.05 21.028±2.13 109.730±5.26 63.997±25.74 41.834±13.04 51.527±13.58 39.500±4.67 49.701±10.17 40.781±12.29 49.101±1.31 31.864±3.52 86.432±41.42 63.680±15.29 57.004±16.52
ENSMUST00000110053 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000110054 N/A N/A N/A N/A N/A N/A N/A N/A 4.937±0.00 N/A 6.892±1.09 N/A 13.641±0.00 17.701±3.18
ENSMUST00000127517 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136368 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137137 N/A 13.543±2.05 N/A N/A N/A N/A N/A N/A N/A N/A N/A 27.458±0.91 N/A N/A
ENSMUST00000139541 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140236 N/A N/A N/A 12.465±1.18 7.744±0.00 N/A N/A N/A N/A N/A N/A 18.749±0.00 N/A N/A
ENSMUST00000142685 11.599±0.74 6.374±1.75 N/A 14.343±0.00 12.876±0.00 N/A N/A 8.647±0.00 7.288±0.00 N/A N/A 18.154±3.41 N/A N/A
ENSMUST00000143657 N/A N/A N/A N/A 3.107±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146221 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154550 11.628±2.92 5.155±0.00 N/A N/A N/A 8.449±0.29 11.388±3.47 9.089±0.85 6.448±0.00 N/A 13.216±2.63 N/A N/A 17.390±0.87
ENSMUSG00000004677 ENSMUST00000071935 4.590±1.29 2.026±0.31 2.247±0.51 3.647±0.89 4.516±0.92 3.326±0.87 1.818±0.44 1.615±0.31 1.460±0.65 5.918±0.66 0.469±0.19 5.480±1.84 3.374±1.89 1.372±0.45
ENSMUST00000168839 N/A 1.498±0.00 N/A N/A 2.938±0.00 N/A N/A 0.620±0.01 0.725±0.27 N/A N/A 2.012±0.00 N/A 1.064±0.18
ENSMUST00000170242 3.624±2.00 6.433±0.76 3.376±0.67 4.947±2.93 8.772±2.01 6.526±2.15 1.859±0.38 1.408±0.62 1.582±0.57 7.584±0.56 0.701±0.22 5.967±2.56 3.202±1.14 1.329±0.32
ENSMUSG00000035439 ENSMUST00000035960 N/A N/A N/A N/A N/A N/A N/A N/A 5.552±2.22 N/A 1.120±0.14 N/A 4.405±0.00 N/A
ENSMUST00000110071 N/A N/A N/A N/A N/A N/A 4.769±0.95 N/A 8.906±3.04 N/A N/A N/A 10.110±5.35 4.019±0.00
ENSMUST00000123495 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128833 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129455 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134361 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144726 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000157039 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Loading