C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RAB11A, member RAS oncogene family
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000004771 Rab11a 10090 - 9:64715299-64737758 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000004892 Rab11a-005 64716953-64737752 protein_coding
  ENSMUST00000165083 Rab11a-003 64726691-64736511 processed_transcript
  ENSMUST00000166857 Rab11a-009 64716770-64726453 processed_transcript
  ENSMUST00000167569 Rab11a-004 64716503-64737742 protein_coding
  ENSMUST00000168366 Rab11a-007 64716706-64726710 protein_coding
  ENSMUST00000169058 Rab11a-002 64716943-64737623 protein_coding
  ENSMUST00000171100 Rab11a-006 64716903-64737730 protein_coding
  ENSMUST00000172298 Rab11a-001 64715299-64737758 protein_coding
  ENSMUST00000172444 Rab11a-008 64716605-64725720 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000004892ENSMUST00000166857ENSMUST00000167569ENSMUST00000168366ENSMUST00000169058ENSMUST00000171100ENSMUST00000172298ENSMUST00000172444
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000004892 20.713±4.48 57.196±5.30 82.541±22.04 N/A 16.385±2.74 40.926±4.54 23.091±0.05 51.049±11.04 33.167±14.89 36.933±3.18 N/A 25.427±6.13 102.491±0.00 45.455±0.70
ENSMUST00000166857 32.867±9.41 35.248±5.25 N/A N/A 17.579±2.61 26.137±2.60 N/A 33.602±1.10 21.969±2.29 N/A N/A 40.882±26.09 95.041±0.14 N/A
ENSMUST00000167569 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.881±0.00 N/A N/A N/A
ENSMUST00000168366 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.971±0.00 N/A N/A
ENSMUST00000169058 N/A N/A 82.199±0.00 154.631±0.00 39.065±0.00 N/A 29.591±0.00 N/A 44.677±4.40 N/A 18.620±0.10 157.343±80.11 154.513±96.36 277.480±0.00
ENSMUST00000171100 N/A N/A N/A N/A 29.961±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 32.753±0.00
ENSMUST00000172298 16.666±1.50 5.228±0.72 28.872±0.93 30.133±13.29 10.875±0.66 9.490±1.65 17.186±3.39 17.147±3.93 11.028±5.99 21.434±4.79 14.863±1.68 11.765±2.99 17.034±10.55 9.037±1.67
ENSMUST00000172444 N/A N/A N/A N/A 14.596±0.00 N/A N/A N/A N/A N/A N/A N/A 44.560±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000910 IEA cytokinesis
GO:0003924 ISS GTPase activity
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005737 IDA cytoplasm
GO:0005739 IDA mitochondrion
GO:0005771 IEA multivesicular body
GO:0005802 ISO trans-Golgi network
GO:0005886 IEA plasma membrane
GO:0007264 IEA small GTPase mediated signal transduction
GO:0010796 IEA regulation of multivesicular body size
GO:0015031 IEA protein transport
GO:0016020 IDA membrane
GO:0016192 IEA vesicle-mediated transport
GO:0030133 IEA transport vesicle
GO:0030424 IDA axon
GO:0031175 ISS neuron projection development
GO:0031489 IEA myosin V binding
GO:0032154 ISS cleavage furrow
GO:0032402 IMP melanosome transport
GO:0036258 IEA multivesicular body assembly
GO:0043234 IEA protein complex
GO:0045335 ISS phagocytic vesicle
GO:0045773 IMP positive regulation of axon extension
GO:0048169 IEA regulation of long-term neuronal synaptic plasticity
GO:0048471 IDA perinuclear region of cytoplasm
GO:0051223 IEA regulation of protein transport
GO:0055037 IDA recycling endosome
GO:0070062 IEA extracellular vesicular exosome
GO:0072659 ISS protein localization to plasma membrane
GO:0090150 IEA establishment of protein localization to membrane
GO:1990182 IEA exosomal secretion

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000103769 RAB11A RAB11A, member RAS oncogene family protein_coding Homo_sapiens

Loading