C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAB11A, member RAS oncogene family
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000004892 Rab11a-005 ENSMUSG00000004771 10090 - 9:64716953-64737752 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000004892
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000004892 20.713±4.48 57.196±5.30 82.541±22.04 16.385±2.74 40.926±4.54 23.091±0.05 51.049±11.04 33.167±14.89 36.933±3.18 25.427±6.13 102.491±0.00 45.455±0.70

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005737 IDA cytoplasm
GO:0005739 IDA mitochondrion
GO:0005802 ISO trans-Golgi network
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0016020 IDA membrane
GO:0030424 IDA axon
GO:0045773 IMP positive regulation of axon extension
GO:0048471 IDA perinuclear region of cytoplasm
GO:0055037 IDA recycling endosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261890 RAB11A-001 protein_coding Homo_sapiens 0 822
ENST00000442978 RAB11AP1-001 processed_pseudogene Homo_sapiens 0 449
ENST00000564910 RAB11A-002 protein_coding Homo_sapiens 0 263
ENST00000565075 RAB11A-004 protein_coding Homo_sapiens 0 800
ENST00000566233 RAB11A-009 protein_coding Homo_sapiens 0 881
ENST00000567671 RAB11A-005 protein_coding Homo_sapiens 0 651
ENST00000568850 RAB11A-006 processed_transcript Homo_sapiens 0 398
ENST00000569304 RAB11A-008 processed_transcript Homo_sapiens 0.00000004 62
ENST00000569896 RAB11A-003 protein_coding Homo_sapiens 0 756

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