C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAB11A, member RAS oncogene family
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000172298 Rab11a-001 ENSMUSG00000004771 10090 - 9:64715299-64737758 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000172298
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000172298 16.666±1.50 5.228±0.72 28.872±0.93 30.133±13.29 10.875±0.66 9.490±1.65 17.186±3.39 17.147±3.93 11.028±5.99 21.434±4.79 14.863±1.68 11.765±2.99 17.034±10.55 9.037±1.67

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000910 IEA cytokinesis
GO:0003924 ISS GTPase activity
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005737 IDA cytoplasm
GO:0005739 IDA mitochondrion
GO:0005771 IEA multivesicular body
GO:0005802 ISO trans-Golgi network
GO:0005886 IEA plasma membrane
GO:0007264 IEA small GTPase mediated signal transduction
GO:0010796 IEA regulation of multivesicular body size
GO:0015031 IEA protein transport
GO:0016020 IDA membrane
GO:0016192 IEA vesicle-mediated transport
GO:0030133 IEA transport vesicle
GO:0030424 IDA axon
GO:0031175 ISS neuron projection development
GO:0031489 IEA myosin V binding
GO:0032154 ISS cleavage furrow
GO:0032402 IMP melanosome transport
GO:0036258 IEA multivesicular body assembly
GO:0043234 IEA protein complex
GO:0045335 ISS phagocytic vesicle
GO:0045773 IMP positive regulation of axon extension
GO:0048169 IEA regulation of long-term neuronal synaptic plasticity
GO:0048471 IDA perinuclear region of cytoplasm
GO:0051223 IEA regulation of protein transport
GO:0055037 IDA recycling endosome
GO:0070062 IEA extracellular vesicular exosome
GO:0072659 ISS protein localization to plasma membrane
GO:0090150 IEA establishment of protein localization to membrane
GO:1990182 IEA exosomal secretion

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261890 RAB11A-001 protein_coding Homo_sapiens 0 2407
ENST00000442978 RAB11AP1-001 processed_pseudogene Homo_sapiens 0 721
ENST00000564910 RAB11A-002 protein_coding Homo_sapiens 0 1048
ENST00000565075 RAB11A-004 protein_coding Homo_sapiens 0 800
ENST00000566233 RAB11A-009 protein_coding Homo_sapiens 0 826
ENST00000567671 RAB11A-005 protein_coding Homo_sapiens 0 911
ENST00000568850 RAB11A-006 processed_transcript Homo_sapiens 0 398
ENST00000569304 RAB11A-008 processed_transcript Homo_sapiens 0 348
ENST00000569896 RAB11A-003 protein_coding Homo_sapiens 0 774

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