C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: deoxyribonuclease I
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000005980 Dnase1 10090 + 16:4036942-4040024 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000006136 Dnase1-004 4036970-4040024 protein_coding
  ENSMUST00000120009 Dnase1-001 4037031-4040024 protein_coding
  ENSMUST00000125961 Dnase1-003 4037101-4040024 retained_intron
  ENSMUST00000132466 Dnase1-008 4038222-4038871 retained_intron
  ENSMUST00000137748 Dnase1-005 4036942-4039256 protein_coding
  ENSMUST00000144792 Dnase1-002 4037098-4040023 retained_intron
  ENSMUST00000149670 Dnase1-007 4037276-4038260 retained_intron
  ENSMUST00000157044 Dnase1-006 4036973-4038021 protein_coding
  ENSMUST00000175755 Dnase1-011 4039130-4040024 protein_coding
  ENSMUST00000176642 Dnase1-009 4037304-4039339 retained_intron
  ENSMUST00000177337 Dnase1-010 4037155-4039875 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyENSMUST00000006136ENSMUST00000120009ENSMUST00000144792ENSMUST00000177337
Transcript ID Brain Kidney
ENSMUST00000006136 N/A 160.749±41.99
ENSMUST00000120009 N/A 683.941±86.20
ENSMUST00000144792 6.303±0.48 N/A
ENSMUST00000177337 N/A 234.099±5.49

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000AY CIL_0000AY_0002 CGP 16:3979105-4040024
CIL_0000ON CIL_0000ON_0002 CGP 16:4036942-4077827

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000737 IEA DNA catabolic process, endonucleolytic
GO:0003779 IEA actin binding
GO:0004530 IEA deoxyribonuclease I activity
GO:0004536 IEA deoxyribonuclease activity
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006308 IEA DNA catabolic process
GO:0006915 IEA apoptotic process
GO:0016888 IEA endodeoxyribonuclease activity, producing 5'-phosphomonoesters
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000012539 dnase1 deoxyribonuclease I protein_coding Danio_rerio
ENSG00000213918 DNASE1 deoxyribonuclease I protein_coding Homo_sapiens

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