C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0000ON_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000213918-ENSG00000126602 | CGP | 9606 | 16:3611728-3717597  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000126602  (TRAP1)TNF receptor-associated protein 1 |
ENST00000246957 (TRAP1-001)
|
3658037-3717597 | protein_coding | |
|
ENST00000538171 (TRAP1-003)
|
3658038-3717513 | protein_coding | ||
|
ENST00000570403 (TRAP1-009)
|
3689052-3717512 | nonsense_mediated_decay | ||
|
ENST00000570514 (TRAP1-015)
|
3674336-3676214 | retained_intron | ||
|
ENST00000571011 (TRAP1-007)
|
3686100-3717524 | nonsense_mediated_decay | ||
|
ENST00000571538 (TRAP1-010)
|
3679735-3691133 | protein_coding | ||
|
ENST00000571804 (TRAP1-008)
|
3677498-3717516 | nonsense_mediated_decay | ||
|
ENST00000573872 (TRAP1-012)
|
3666026-3677650 | processed_transcript | ||
|
ENST00000574175 (TRAP1-013)
|
3672802-3677570 | nonsense_mediated_decay | ||
|
ENST00000574494 (TRAP1-017)
|
3658038-3662267 | retained_intron | ||
|
ENST00000574941 (TRAP1-006)
|
3678285-3717526 | processed_transcript | ||
|
ENST00000575671 (TRAP1-004)
|
3658038-3678304 | protein_coding | ||
|
ENST00000575707 (TRAP1-016)
|
3651639-3661990 | nonsense_mediated_decay | ||
|
ENST00000575854 (TRAP1-011)
|
3674656-3677658 | processed_transcript | ||
|
ENST00000576106 (TRAP1-005)
|
3678366-3717553 | processed_transcript | ||
|
ENST00000576335 (TRAP1-018)
|
3666082-3689075 | protein_coding | ||
|
ENST00000576788 (TRAP1-014)
|
3676094-3676946 | processed_transcript | ||
|
ENSG00000276754 (RP11-461A8.5) |
ENST00000622137 (RP11-461A8.5-001)
|
3686998-3687380 | antisense | |
| CIL_0000ON_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000005980-ENSMUSG00000005981 | CGP | 10090 | 16:4036942-4077827 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000005980 (Dnase1) deoxyribonuclease I |
ENSMUST00000006136 (Dnase1-004)
|
4036970-4040024 | protein_coding | |
|
ENSMUST00000120009 (Dnase1-001)
|
4037031-4040024 | protein_coding | ||
|
ENSMUST00000125961 (Dnase1-003)
|
4037101-4040024 | retained_intron | ||
|
ENSMUST00000132466 (Dnase1-008)
|
4038222-4038871 | retained_intron | ||
|
ENSMUST00000137748 (Dnase1-005)
|
4036942-4039256 | protein_coding | ||
|
ENSMUST00000144792 (Dnase1-002)
|
4037098-4040023 | retained_intron | ||
|
ENSMUST00000149670 (Dnase1-007)
|
4037276-4038260 | retained_intron | ||
|
ENSMUST00000157044 (Dnase1-006)
|
4036973-4038021 | protein_coding | ||
|
ENSMUST00000175755 (Dnase1-011)
|
4039130-4040024 | protein_coding | ||
|
ENSMUST00000176642 (Dnase1-009)
|
4037304-4039339 | retained_intron | ||
|
ENSMUST00000177337 (Dnase1-010)
|
4037155-4039875 | nonsense_mediated_decay | ||
|
ENSMUSG00000005981 (Trap1) TNF receptor-associated protein 1 |
ENSMUST00000006137 (Trap1-001)
|
4039971-4077827 | protein_coding | |
|
ENSMUST00000137945 (Trap1-004)
|
4040140-4044698 | processed_transcript | ||
|
ENSMUST00000138594 (Trap1-002)
|
4065330-4077827 | retained_intron | ||
|
ENSMUST00000150354 (Trap1-003)
|
4056416-4077775 | nonsense_mediated_decay | ||
|
ENSMUSG00000093262 (Gm23413) predicted gene, 23413 |
ENSMUST00000175521 (Gm23413-201)
|
4057373-4057497 | miRNA | |
Expression Patterns
|
