C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: N-ethylmaleimide sensitive fusion protein attachment protein alpha
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000006024 Napa 10090 + 7:16098458-16117975 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000006181 Napa-001 16098458-16117975 protein_coding
  ENSMUST00000124563 Napa-003 16098632-16113134 retained_intron
  ENSMUST00000127637 Napa-002 16098608-16113535 processed_transcript
  ENSMUST00000132828 Napa-004 16098638-16109309 processed_transcript
  ENSMUST00000139507 Napa-005 16109051-16114225 retained_intron
  ENSMUST00000140640 Napa-007 16115104-16116739 processed_transcript
  ENSMUST00000150208 Napa-006 16113644-16116559 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000006181ENSMUST00000127637ENSMUST00000140640ENSMUST00000150208
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000006181 69.942±9.11 70.201±2.50 34.078±3.87 30.445±11.47 44.873±18.69 45.263±1.87 36.562±8.50 44.204±10.45 33.972±12.67 41.043±2.87 36.238±2.46 57.225±21.10 39.640±14.95 45.979±21.94
ENSMUST00000127637 N/A N/A N/A 114.618±0.00 70.131±0.00 N/A N/A N/A N/A N/A N/A 73.706±0.00 82.302±1.16 33.678±0.00
ENSMUST00000140640 N/A 257.604±14.78 N/A 50.899±0.00 140.989±19.47 114.274±4.73 N/A 84.925±9.14 57.383±13.07 60.372±0.72 N/A 137.444±58.32 49.668±6.38 18.275±0.00
ENSMUST00000150208 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 26.772±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000149 ISO SNARE binding
GO:0005515 IPI protein binding
GO:0006886 IMP intracellular protein transport
GO:0007420 IMP brain development
GO:0010807 IGI regulation of synaptic vesicle priming
GO:0016020 IEA membrane
GO:0019905 IDA syntaxin binding
GO:0030182 IMP neuron differentiation
GO:0035249 IGI synaptic transmission, glutamatergic
GO:0035494 IGI SNARE complex disassembly
GO:0045176 IMP apical protein localization
GO:0070044 IDA synaptobrevin 2-SNAP-25-syntaxin-1a complex
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000020405 napa N-ethylmaleimide sensitive fusion protein attachment protein alpha protein_coding Danio_rerio
ENSDARG00000067605 NAPA (2 of 2) N-ethylmaleimide-sensitive factor attachment protein, alpha protein_coding Danio_rerio
ENSG00000105402 NAPA N-ethylmaleimide-sensitive factor attachment protein, alpha protein_coding Homo_sapiens

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