C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: N-ethylmaleimide-sensitive factor attachment protein, alpha
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000105402 NAPA 9606 - 19:47487637-47515240 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000263354 NAPA-001 47487637-47515240 protein_coding
  ENST00000593761 NAPA-017 47489722-47515026 protein_coding
  ENST00000593785 NAPA-004 47495773-47515039 processed_transcript
  ENST00000593905 NAPA-021 47489754-47493640 retained_intron
  ENST00000594001 NAPA-002 47487680-47515058 nonsense_mediated_decay
  ENST00000594155 NAPA-016 47490788-47500749 protein_coding
  ENST00000594217 NAPA-024 47487642-47492044 nonsense_mediated_decay
  ENST00000594288 NAPA-014 47493018-47512795 retained_intron
  ENST00000594740 NAPA-023 47493071-47515032 retained_intron
  ENST00000595227 NAPA-006 47487679-47515020 protein_coding
  ENST00000595826 NAPA-007 47492950-47515005 processed_transcript
  ENST00000596892 NAPA-018 47492994-47497502 processed_transcript
  ENST00000597118 NAPA-013 47492961-47512802 protein_coding
  ENST00000597160 NAPA-003 47496596-47515039 processed_transcript
  ENST00000597271 NAPA-010 47487662-47491475 retained_intron
  ENST00000597274 NAPA-011 47493083-47515091 nonsense_mediated_decay
  ENST00000597778 NAPA-009 47487638-47497096 retained_intron
  ENST00000598615 NAPA-015 47492061-47512766 protein_coding
  ENST00000601208 NAPA-012 47490844-47515043 nonsense_mediated_decay
  ENST00000601927 NAPA-020 47493101-47495826 retained_intron
  ENST00000602082 NAPA-005 47492586-47515022 retained_intron
  ENST00000602174 NAPA-019 47492877-47514945 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000263354ENST00000593761ENST00000594001ENST00000594217ENST00000594740ENST00000595227ENST00000597274ENST00000597778
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000263354 44.325±0.00 41.204±0.00 8.229±0.00 49.051±18.91 27.042±23.21 19.850±13.96 21.962±17.62 36.354±20.95 37.903±33.25 32.571±24.73 47.094±30.53 42.569±32.19 38.943±22.32 36.597±25.36
ENST00000593761 N/A N/A N/A N/A 4.765±0.00 N/A 2.361±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000594001 17.773±0.00 20.649±0.00 N/A 24.215±0.00 24.881±0.00 14.575±0.00 12.806±0.00 29.847±0.00 29.925±0.00 22.217±0.00 N/A 12.304±0.00 14.348±0.06 25.930±6.97
ENST00000594217 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 32.945±0.00 N/A
ENST00000594740 N/A N/A 7.527±0.00 N/A 3.328±0.00 N/A N/A 13.583±0.00 3.955±0.00 N/A 7.562±0.00 N/A N/A N/A
ENST00000595227 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.117±0.00 13.312±0.84 N/A
ENST00000597274 N/A N/A N/A N/A 14.300±0.00 N/A 5.380±0.00 N/A N/A 18.994±0.00 19.018±0.00 16.476±0.00 11.438±0.00 24.051±0.00
ENST00000597778 N/A N/A 1.035±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000449 CIL_000449_0002 CGP 19:47487637-47555856

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000149 IEA SNARE binding
GO:0005515 IPI protein binding
GO:0005829 TAS cytosol
GO:0006886 IEA intracellular protein transport
GO:0006891 TAS intra-Golgi vesicle-mediated transport
GO:0006892 TAS post-Golgi vesicle-mediated transport
GO:0007420 IEA brain development
GO:0010807 IEA regulation of synaptic vesicle priming
GO:0016020 IDA membrane
GO:0019905 IEA syntaxin binding
GO:0030182 IEA neuron differentiation
GO:0035249 IEA synaptic transmission, glutamatergic
GO:0035494 IEA SNARE complex disassembly
GO:0045176 IEA apical protein localization
GO:0061024 TAS membrane organization
GO:0061025 TAS membrane fusion
GO:0070044 IEA synaptobrevin 2-SNAP-25-syntaxin-1a complex
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000020405 napa N-ethylmaleimide sensitive fusion protein attachment protein alpha protein_coding Danio_rerio
ENSDARG00000067605 NAPA (2 of 2) N-ethylmaleimide-sensitive factor attachment protein, alpha protein_coding Danio_rerio
ENSMUSG00000006024 Napa N-ethylmaleimide sensitive fusion protein attachment protein alpha protein_coding Mus_musculus

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