C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: N-ethylmaleimide sensitive fusion protein attachment protein alpha
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000006181 Napa-001 ENSMUSG00000006024 10090 + 7:16098458-16117975 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000006181
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000006181 69.942±9.11 70.201±2.50 34.078±3.87 30.445±11.47 44.873±18.69 45.263±1.87 36.562±8.50 44.204±10.45 33.972±12.67 41.043±2.87 36.238±2.46 57.225±21.10 39.640±14.95 45.979±21.94

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000149 ISO SNARE binding
GO:0005515 IPI protein binding
GO:0006886 IMP intracellular protein transport
GO:0007420 IMP brain development
GO:0010807 IGI regulation of synaptic vesicle priming
GO:0016020 IEA membrane
GO:0019905 IDA syntaxin binding
GO:0030182 IMP neuron differentiation
GO:0035249 IGI synaptic transmission, glutamatergic
GO:0035494 IGI SNARE complex disassembly
GO:0045176 IMP apical protein localization
GO:0070044 IDA synaptobrevin 2-SNAP-25-syntaxin-1a complex
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000018625 napa-001 protein_coding Danio_rerio 0 457
ENST00000263354 NAPA-001 protein_coding Homo_sapiens 0 1179
ENST00000593761 NAPA-017 protein_coding Homo_sapiens 0 795
ENST00000593785 NAPA-004 processed_transcript Homo_sapiens 0 392
ENST00000593905 NAPA-021 retained_intron Homo_sapiens 0 538
ENST00000594001 NAPA-002 nonsense_mediated_decay Homo_sapiens 0 789
ENST00000594155 NAPA-016 protein_coding Homo_sapiens 0 311
ENST00000594288 NAPA-014 retained_intron Homo_sapiens 0 496
ENST00000594740 NAPA-023 retained_intron Homo_sapiens 0 547
ENST00000595227 NAPA-006 protein_coding Homo_sapiens 0 789
ENST00000595826 NAPA-007 processed_transcript Homo_sapiens 0 496
ENST00000596892 NAPA-018 processed_transcript Homo_sapiens 0.00000000000003 82
ENST00000597118 NAPA-013 protein_coding Homo_sapiens 0 603
ENST00000597274 NAPA-011 nonsense_mediated_decay Homo_sapiens 0 387
ENST00000597778 NAPA-009 retained_intron Homo_sapiens 0 457
ENST00000598615 NAPA-015 protein_coding Homo_sapiens 0 438
ENST00000601208 NAPA-012 nonsense_mediated_decay Homo_sapiens 0 789
ENST00000602082 NAPA-005 retained_intron Homo_sapiens 3e-28 130
ENST00000602174 NAPA-019 retained_intron Homo_sapiens 0 387

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