C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: N-ethylmaleimide sensitive fusion protein attachment protein alpha
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000127637 Napa-002 ENSMUSG00000006024 10090 + 7:16098608-16113535 processed_transcript

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastOvaryPlacentaTestisENSMUST00000127637
Transcript ID Brain Breast Ovary Placenta Testis
ENSMUST00000127637 114.618±0.00 70.131±0.00 73.706±0.00 82.302±1.16 33.678±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263354 NAPA-001 protein_coding Homo_sapiens 0 470
ENST00000593761 NAPA-017 protein_coding Homo_sapiens 0 470
ENST00000593785 NAPA-004 processed_transcript Homo_sapiens 2e-36 158
ENST00000593905 NAPA-021 retained_intron Homo_sapiens 0 250
ENST00000594001 NAPA-002 nonsense_mediated_decay Homo_sapiens 0 315
ENST00000594155 NAPA-016 protein_coding Homo_sapiens 0 311
ENST00000594288 NAPA-014 retained_intron Homo_sapiens 0 387
ENST00000594740 NAPA-023 retained_intron Homo_sapiens 0 313
ENST00000595227 NAPA-006 protein_coding Homo_sapiens 0 315
ENST00000595826 NAPA-007 processed_transcript Homo_sapiens 0 387
ENST00000596892 NAPA-018 processed_transcript Homo_sapiens 0.00000000000003 82
ENST00000597118 NAPA-013 protein_coding Homo_sapiens 0 470
ENST00000597274 NAPA-011 nonsense_mediated_decay Homo_sapiens 0 512
ENST00000597778 NAPA-009 retained_intron Homo_sapiens 5e-16 92
ENST00000598615 NAPA-015 protein_coding Homo_sapiens 0 316
ENST00000601208 NAPA-012 nonsense_mediated_decay Homo_sapiens 0 470
ENST00000602082 NAPA-005 retained_intron Homo_sapiens 1e-16 92
ENST00000602174 NAPA-019 retained_intron Homo_sapiens 0 512

Loading