C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATPase, H+ transporting, lysosomal V1 subunit B2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000006273 Atp6v1b2 10090 + 8:69088646-69113711 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000006435 Atp6v1b2-001 69088646-69113711 protein_coding
  ENSMUST00000123290 Atp6v1b2-007 69102213-69103063 retained_intron
  ENSMUST00000125211 Atp6v1b2-005 69088789-69096586 retained_intron
  ENSMUST00000129797 Atp6v1b2-006 69103128-69108340 retained_intron
  ENSMUST00000153079 Atp6v1b2-003 69088768-69107363 retained_intron
  ENSMUST00000153680 Atp6v1b2-004 69088787-69102249 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000006435ENSMUST00000129797ENSMUST00000153680
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000006435 43.720±7.19 23.851±1.21 24.807±2.25 74.268±19.97 31.378±4.87 18.743±3.22 24.043±0.27 122.062±12.92 23.157±9.61 42.677±2.71 16.369±1.43 31.100±5.79 56.129±26.98 11.567±4.36
ENSMUST00000129797 N/A N/A N/A N/A N/A 18.340±2.84 N/A N/A N/A N/A N/A 25.723±2.69 N/A N/A
ENSMUST00000153680 N/A 32.434±1.28 N/A N/A N/A 17.537±0.17 N/A N/A N/A N/A N/A 38.203±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003TS CIL_0003TS_0002 CGP 8:68880491-69089235
CIL_0003TP CIL_0003TP_0002 CGP 8:69037711-69113711
CIL_0004EF CIL_0004EF_0002 CGP 8:69088646-69184225

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001726 IDA ruffle
GO:0005524 IEA ATP binding
GO:0005737 IDA cytoplasm
GO:0005765 IEA lysosomal membrane
GO:0005829 IDA cytosol
GO:0005886 IDA plasma membrane
GO:0005902 IDA microvillus
GO:0015991 IEA ATP hydrolysis coupled proton transport
GO:0016021 IEA integral component of membrane
GO:0016820 IEA hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
GO:0033180 IEA proton-transporting V-type ATPase, V1 domain
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0046034 IEA ATP metabolic process
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000043465 atp6v1b2 ATPase, H+ transporting, lysosomal V1 subunit B2 protein_coding Danio_rerio
ENSG00000147416 ATP6V1B2 ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2 protein_coding Homo_sapiens

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