C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, H+ transporting, lysosomal V1 subunit B2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000006435 Atp6v1b2-001 ENSMUSG00000006273 10090 + 8:69088646-69113711 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000006435
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000006435 43.720±7.19 23.851±1.21 24.807±2.25 74.268±19.97 31.378±4.87 18.743±3.22 24.043±0.27 122.062±12.92 23.157±9.61 42.677±2.71 16.369±1.43 31.100±5.79 56.129±26.98 11.567±4.36

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003TS CIL_0003TS_0002 CGP 8:68880491-69089235
CIL_0003TP CIL_0003TP_0002 CGP 8:69037711-69113711
CIL_0004EF CIL_0004EF_0002 CGP 8:69088646-69184225

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001726 IDA ruffle
GO:0005524 IEA ATP binding
GO:0005737 IDA cytoplasm
GO:0005765 IEA lysosomal membrane
GO:0005829 IDA cytosol
GO:0005886 IDA plasma membrane
GO:0005902 IDA microvillus
GO:0015991 IEA ATP hydrolysis coupled proton transport
GO:0016021 IEA integral component of membrane
GO:0016820 IEA hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
GO:0033180 IEA proton-transporting V-type ATPase, V1 domain
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0046034 IEA ATP metabolic process
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000276390 ATP6V1B2-001 protein_coding Homo_sapiens 0 2204
ENST00000523482 ATP6V1B2-003 retained_intron Homo_sapiens 0 1181

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