C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ubiquitin specific peptidase 19
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000006676 Usp19 10090 + 9:108490676-108502333 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000006854 Usp19-201 108490676-108501697 protein_coding
  ENSMUST00000085044 Usp19-202 108490676-108502333 protein_coding
  ENSMUST00000166103 Usp19-203 108490676-108502333 protein_coding
  ENSMUST00000178075 Usp19-204 108490676-108502333 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000006854ENSMUST00000085044ENSMUST00000166103ENSMUST00000178075
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000006854 16.146±0.83 22.221±0.00 N/A 15.518±7.54 13.420±3.66 11.413±0.88 9.980±0.83 10.518±0.89 5.193±1.67 13.872±0.49 9.683±0.98 23.616±7.87 11.017±5.33 13.564±1.03
ENSMUST00000085044 N/A 13.258±0.20 5.656±0.00 N/A N/A N/A N/A N/A 2.719±0.58 N/A N/A 9.565±1.86 10.378±3.28 4.116±0.00
ENSMUST00000166103 N/A 13.876±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000178075 25.775±2.28 56.421±7.32 20.696±2.41 21.720±5.94 24.187±9.30 25.549±3.02 17.277±2.35 18.951±3.06 11.764±2.71 24.974±2.37 24.465±1.87 37.195±8.32 19.212±10.09 25.112±0.61

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004843 IMP ubiquitin-specific protease activity
GO:0005515 IPI protein binding
GO:0005789 ISS endoplasmic reticulum membrane
GO:0005829 IDA cytosol
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0008234 IEA cysteine-type peptidase activity
GO:0014732 ISS skeletal muscle atrophy
GO:0016021 IEA integral component of membrane
GO:0016579 ISS protein deubiquitination
GO:0030433 ISS ER-associated ubiquitin-dependent protein catabolic process
GO:0031647 ISS regulation of protein stability
GO:0034976 ISS response to endoplasmic reticulum stress
GO:0036459 IEA ubiquitinyl hydrolase activity
GO:0046872 IEA metal ion binding
GO:0048642 IMP negative regulation of skeletal muscle tissue development
GO:0090068 ISS positive regulation of cell cycle process
GO:1900037 ISS regulation of cellular response to hypoxia

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000004132 usp19 ubiquitin specific peptidase 19 protein_coding Danio_rerio
ENSG00000172046 USP19 ubiquitin specific peptidase 19 protein_coding Homo_sapiens

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