C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin specific peptidase 19
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000085044 Usp19-202 ENSMUSG00000006676 10090 + 9:108490676-108502333 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderLiverOvaryPlacentaTestisENSMUST00000085044
Transcript ID Adrenal Bladder Liver Ovary Placenta Testis
ENSMUST00000085044 13.258±0.20 5.656±0.00 2.719±0.58 9.565±1.86 10.378±3.28 4.116±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004843 IMP ubiquitin-specific protease activity
GO:0005515 IPI protein binding
GO:0005789 ISS endoplasmic reticulum membrane
GO:0005829 IDA cytosol
GO:0014732 ISS skeletal muscle atrophy
GO:0016021 IEA integral component of membrane
GO:0016579 ISS protein deubiquitination
GO:0030433 ISS ER-associated ubiquitin-dependent protein catabolic process
GO:0031647 ISS regulation of protein stability
GO:0034976 ISS response to endoplasmic reticulum stress
GO:0046872 IEA metal ion binding
GO:0048642 IMP negative regulation of skeletal muscle tissue development
GO:0090068 ISS positive regulation of cell cycle process
GO:1900037 ISS regulation of cellular response to hypoxia

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000306026 USP19-016 protein_coding Homo_sapiens 0 1465
ENST00000398888 USP19-001 protein_coding Homo_sapiens 0 3755
ENST00000398892 USP19-002 protein_coding Homo_sapiens 0 4796
ENST00000398896 USP19-004 protein_coding Homo_sapiens 0 4337
ENST00000398898 USP19-005 protein_coding Homo_sapiens 0 5265
ENST00000417901 USP19-012 protein_coding Homo_sapiens 0 4918
ENST00000434032 USP19-014 protein_coding Homo_sapiens 0 4337
ENST00000453664 USP19-013 protein_coding Homo_sapiens 0 4512
ENST00000464931 USP19-010 processed_transcript Homo_sapiens 0 544
ENST00000465902 USP19-018 processed_transcript Homo_sapiens 0 329
ENST00000479073 USP19-006 protein_coding Homo_sapiens 0 187
ENST00000480163 USP19-009 processed_transcript Homo_sapiens 0 217
ENST00000483667 USP19-017 processed_transcript Homo_sapiens 0 545
ENST00000488993 USP19-007 processed_transcript Homo_sapiens 0 553
ENST00000491859 USP19-008 processed_transcript Homo_sapiens 0 403

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