C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin specific peptidase 19
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000006854 Usp19-201 ENSMUSG00000006676 10090 + 9:108490676-108501697 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000006854
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000006854 16.146±0.83 22.221±0.00 15.518±7.54 13.420±3.66 11.413±0.88 9.980±0.83 10.518±0.89 5.193±1.67 13.872±0.49 9.683±0.98 23.616±7.87 11.017±5.33 13.564±1.03

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004843 IMP ubiquitin-specific protease activity
GO:0005515 IPI protein binding
GO:0005789 ISS endoplasmic reticulum membrane
GO:0005829 IDA cytosol
GO:0014732 ISS skeletal muscle atrophy
GO:0016021 IEA integral component of membrane
GO:0016579 ISS protein deubiquitination
GO:0030433 ISS ER-associated ubiquitin-dependent protein catabolic process
GO:0031647 ISS regulation of protein stability
GO:0034976 ISS response to endoplasmic reticulum stress
GO:0046872 IEA metal ion binding
GO:0048642 IMP negative regulation of skeletal muscle tissue development
GO:0090068 ISS positive regulation of cell cycle process
GO:1900037 ISS regulation of cellular response to hypoxia

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000306026 USP19-016 protein_coding Homo_sapiens 0 1465
ENST00000398888 USP19-001 protein_coding Homo_sapiens 0 4307
ENST00000398892 USP19-002 protein_coding Homo_sapiens 0 5456
ENST00000398896 USP19-004 protein_coding Homo_sapiens 0 3794
ENST00000398898 USP19-005 protein_coding Homo_sapiens 0 4723
ENST00000417901 USP19-012 protein_coding Homo_sapiens 0 4375
ENST00000434032 USP19-014 protein_coding Homo_sapiens 0 4839
ENST00000453664 USP19-013 protein_coding Homo_sapiens 0 4093
ENST00000464931 USP19-010 processed_transcript Homo_sapiens 0 544
ENST00000465902 USP19-018 processed_transcript Homo_sapiens 0 329
ENST00000479073 USP19-006 protein_coding Homo_sapiens 0 187
ENST00000480163 USP19-009 processed_transcript Homo_sapiens 0 217
ENST00000483667 USP19-017 processed_transcript Homo_sapiens 0 545
ENST00000488993 USP19-007 processed_transcript Homo_sapiens 0 553
ENST00000491859 USP19-008 processed_transcript Homo_sapiens 0 496

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