C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA D130043K22 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000006711 D130043K22Rik 10090 + 13:24845135-24901270 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000006893 D130043K22Rik-001 24845135-24901270 protein_coding
  ENSMUST00000141572 D130043K22Rik-002 24845135-24901263 nonsense_mediated_decay
  ENSMUST00000169411 D130043K22Rik-003 24880525-24882659 processed_transcript
  ENSMUST00000171262 D130043K22Rik-004 24893081-24899848 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000006893ENSMUST00000141572ENSMUST00000169411ENSMUST00000171262
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000006893 N/A 0.189±0.01 N/A 2.753±2.95 N/A 0.233±0.03 N/A 0.172±0.07 0.012±0.00 0.221±0.12 N/A 0.293±0.10 0.221±0.12 0.439±0.22
ENSMUST00000141572 0.017±0.01 0.166±0.04 0.020±0.02 0.137±0.00 0.018±0.01 0.065±0.00 0.015±0.01 0.116±0.04 N/A N/A 0.027±0.01 0.310±0.02 0.023±0.00 N/A
ENSMUST00000169411 N/A N/A N/A N/A N/A N/A 0.149±0.01 N/A 5.921±0.00 N/A N/A N/A N/A N/A
ENSMUST00000171262 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.058±0.00 0.642±0.00 0.391±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000LD CIL_0000LD_0002 CGP 13:24831679-24901270
CIL_0000LE CIL_0000LE_0002 CGP 13:24845135-24937661

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001764 ISS neuron migration
GO:0003674 ND molecular_function
GO:0005769 ISS early endosome
GO:0005886 ISS plasma membrane
GO:0016021 IEA integral component of membrane
GO:2000171 ISS negative regulation of dendrite development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074486 protein_coding Danio_rerio
ENSG00000137261 KIAA0319 KIAA0319 protein_coding Homo_sapiens

Loading