C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA D130043K22 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000006893 D130043K22Rik-001 ENSMUSG00000006711 10090 + 13:24845135-24901270 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000006893
Transcript ID Adrenal Brain Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000006893 0.189±0.01 2.753±2.95 0.233±0.03 0.172±0.07 0.012±0.00 0.221±0.12 0.293±0.10 0.221±0.12 0.439±0.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000LD CIL_0000LD_0002 CGP 13:24831679-24901270
CIL_0000LE CIL_0000LE_0002 CGP 13:24845135-24937661

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001764 ISS neuron migration
GO:0003674 ND molecular_function
GO:0005769 ISS early endosome
GO:0005886 ISS plasma membrane
GO:0016021 IEA integral component of membrane
GO:2000171 ISS negative regulation of dendrite development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000378214 KIAA0319-001 protein_coding Homo_sapiens 0 2265
ENST00000430948 KIAA0319-201 protein_coding Homo_sapiens 0 2265
ENST00000535378 KIAA0319-202 protein_coding Homo_sapiens 0 2265
ENST00000537886 KIAA0319-203 protein_coding Homo_sapiens 0 1934
ENST00000543707 KIAA0319-204 protein_coding Homo_sapiens 0 2265
ENST00000616673 KIAA0319-205 protein_coding Homo_sapiens 0 1533

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