C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0000LE_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000074486-ENSDARG00000076544 CGP 7955 16:38321790-38359317
GeneTranscriptPositionBiotype
ENSDARG00000074486 ()
ENSDART00000113025 () 38321790-38345262 protein_coding
ENSDARG00000076544 (aldh5a1)
aldehyde dehydrogenase 5 family, member A1 (succinate-semialdehyde dehydrogenase)
ENSDART00000109087 (aldh5a1-001) 38350706-38359317 protein_coding
ENSDART00000131516 (aldh5a1-003) 38347771-38358935 protein_coding
ENSDART00000135997 (aldh5a1-002) 38353315-38355541 retained_intron
CIL_0000LE_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000006711-ENSMUSG00000035936 CGP 10090 13:24845135-24937661
GeneTranscriptPositionBiotype
ENSMUSG00000006711 (D130043K22Rik)
RIKEN cDNA D130043K22 gene
ENSMUST00000006893 (D130043K22Rik-001) 24845135-24901270 protein_coding
ENSMUST00000141572 (D130043K22Rik-002) 24845135-24901263 nonsense_mediated_decay
ENSMUST00000169411 (D130043K22Rik-003) 24880525-24882659 processed_transcript
ENSMUST00000171262 (D130043K22Rik-004) 24893081-24899848 processed_transcript
ENSMUSG00000035936 (Aldh5a1)
aldhehyde dehydrogenase family 5, subfamily A1
ENSMUST00000037615 (Aldh5a1-001) 24907579-24937661 protein_coding
ENSMUSG00000086448 (9330162012Rik)
cDNA RIKEN 9330162012 gene
ENSMUST00000154919 (9330162012Rik-001) 24937401-24941417 processed_transcript
ENSMUSG00000086796 (4932702P03Rik)
RIKEN cDNA 4932702P03 gene
ENSMUST00000138447 (4932702P03Rik-001) 24905596-24907280 antisense
ENSMUST00000151220 (4932702P03Rik-002) 24905593-24914272 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000LE_0001ENSDARG00000074486ENSDART00000113025ENSDARG00000076544ENSDART00000109087ENSDART00000131516ENSDART00000135997CIL_0000LE_0002ENSMUSG00000006711ENSMUST00000006893ENSMUST00000141572ENSMUST00000169411ENSMUST00000171262ENSMUSG00000035936ENSMUST00000037615ENSMUSG00000086448ENSMUST00000154919ENSMUSG00000086796ENSMUST00000138447ENSMUST00000151220
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000LE_0001ENSDARG00000074486ENSDART00000113025ENSDARG00000076544ENSDART00000109087ENSDART00000131516CIL_0000LE_0002ENSMUSG00000006711ENSMUST00000006893ENSMUST00000141572ENSMUST00000169411ENSMUST00000171262ENSMUSG00000035936ENSMUST00000037615ENSMUSG00000086448ENSMUST00000154919ENSMUSG00000086796ENSMUST00000138447ENSMUST00000151220
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000074486 ENSDART00000113025 N/A N/A N/A N/A N/A N/A 0.477±0.00 0.101±0.00 0.035±0.00 N/A 0.524±0.00 N/A N/A N/A
ENSDARG00000076544 ENSDART00000109087 N/A N/A N/A 2.155±0.00 N/A N/A 0.221±0.01 N/A 0.038±0.00 N/A 1.096±0.00 N/A N/A N/A
ENSDART00000131516 N/A N/A N/A 12.360±1.99 N/A N/A 1.401±0.92 7.792±0.40 0.107±0.00 N/A 0.956±0.00 N/A N/A N/A
ENSDART00000135997 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000006711 ENSMUST00000006893 N/A 0.189±0.01 N/A 2.753±2.95 N/A 0.233±0.03 N/A 0.172±0.07 0.012±0.00 0.221±0.12 N/A 0.293±0.10 0.221±0.12 0.439±0.22
ENSMUST00000141572 0.017±0.01 0.166±0.04 0.020±0.02 0.137±0.00 0.018±0.01 0.065±0.00 0.015±0.01 0.116±0.04 N/A N/A 0.027±0.01 0.310±0.02 0.023±0.00 N/A
ENSMUST00000169411 N/A N/A N/A N/A N/A N/A 0.149±0.01 N/A 5.921±0.00 N/A N/A N/A N/A N/A
ENSMUST00000171262 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.058±0.00 0.642±0.00 0.391±0.00 N/A
ENSMUSG00000035936 ENSMUST00000037615 3.315±0.11 2.723±0.19 3.796±0.72 9.636±3.52 2.042±0.42 1.783±0.40 5.445±0.28 8.865±0.33 5.923±2.61 1.807±0.35 2.055±0.15 3.007±1.32 1.033±0.51 1.090±0.15
ENSMUSG00000086448 ENSMUST00000154919 0.796±0.04 N/A 2.017±0.03 N/A 1.099±0.30 1.130±0.18 N/A N/A 3.703±0.57 1.077±0.15 N/A 1.542±0.48 0.279±0.00 N/A
ENSMUSG00000086796 ENSMUST00000138447 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 18.244±7.67
ENSMUST00000151220 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.466±1.73

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