C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000LD_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000069941-ENSDARG00000074486 CGP 7955 16:38314413-38345262
GeneTranscriptPositionBiotype
ENSDARG00000069941 (TDP2 (2 of 2))
tyrosyl-DNA phosphodiesterase 2 		ENSDART00000102212 (TDP2 (2 of 2)-201) 38314413-38318627 protein_coding
ENSDARG00000074486 ()
 ENSDART00000113025 () 38321790-38345262 protein_coding
CIL_0000LD_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000035958-ENSMUSG00000006711 CGP 10090 13:24831679-24901270
GeneTranscriptPositionBiotype
ENSMUSG00000006711 (D130043K22Rik)
RIKEN cDNA D130043K22 gene 		ENSMUST00000006893 (D130043K22Rik-001) 24845135-24901270 protein_coding
ENSMUST00000141572 (D130043K22Rik-002) 24845135-24901263 nonsense_mediated_decay
ENSMUST00000169411 (D130043K22Rik-003) 24880525-24882659 processed_transcript
ENSMUST00000171262 (D130043K22Rik-004) 24893081-24899848 processed_transcript
ENSMUSG00000035958 (Tdp2)
tyrosyl-DNA phosphodiesterase 2 		ENSMUST00000038039 (Tdp2-001) 24831679-24842153 protein_coding
ENSMUST00000130788 (Tdp2-002) 24831822-24838265 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000LD_0001ENSDARG00000069941ENSDART00000102212ENSDARG00000074486ENSDART00000113025CIL_0000LD_0002ENSMUSG00000006711ENSMUST00000006893ENSMUST00000141572ENSMUST00000169411ENSMUST00000171262ENSMUSG00000035958ENSMUST00000038039ENSMUST00000130788
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000LD_0001ENSDARG00000069941ENSDART00000102212ENSDARG00000074486ENSDART00000113025CIL_0000LD_0002ENSMUSG00000006711ENSMUST00000006893ENSMUST00000141572ENSMUST00000169411ENSMUST00000171262ENSMUSG00000035958ENSMUST00000038039
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000069941 ENSDART00000102212 N/A N/A N/A 0.190±0.10 N/A N/A 0.655±0.58 1.268±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000074486 ENSDART00000113025 N/A N/A N/A N/A N/A N/A 0.477±0.00 0.101±0.00 0.035±0.00 N/A 0.524±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000006711 ENSMUST00000006893 N/A 0.189±0.01 N/A 2.753±2.95 N/A 0.233±0.03 N/A 0.172±0.07 0.012±0.00 0.221±0.12 N/A 0.293±0.10 0.221±0.12 0.439±0.22
ENSMUST00000141572 0.017±0.01 0.166±0.04 0.020±0.02 0.137±0.00 0.018±0.01 0.065±0.00 0.015±0.01 0.116±0.04 N/A N/A 0.027±0.01 0.310±0.02 0.023±0.00 N/A
ENSMUST00000169411 N/A N/A N/A N/A N/A N/A 0.149±0.01 N/A 5.921±0.00 N/A N/A N/A N/A N/A
ENSMUST00000171262 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.058±0.00 0.642±0.00 0.391±0.00 N/A
ENSMUSG00000035958 ENSMUST00000038039 3.684±1.17 4.455±1.47 7.475±2.05 9.819±6.49 3.672±2.00 5.785±0.82 2.543±0.35 7.404±1.11 11.357±5.64 4.218±0.67 2.624±0.53 5.450±1.80 9.227±5.72 6.851±2.13
ENSMUST00000130788 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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