C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 0610009B22 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000007777 0610009B22Rik 10090 - 11:51685386-51688874 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000007921 0610009B22Rik-001 51685386-51688653 protein_coding
  ENSMUST00000109098 0610009B22Rik-002 51685386-51688874 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000007921ENSMUST00000109098
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000007921 14.517±2.78 7.975±1.52 17.429±3.24 15.678±7.01 8.922±2.61 8.235±2.01 11.276±1.70 20.448±2.18 15.947±1.71 6.700±0.48 18.643±1.62 8.040±7.21 12.085±4.81 22.197±6.77
ENSMUST00000109098 N/A 0.501±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.887±0.00 N/A 3.731±0.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089W CIL_00089W_0002 VISTA 11:51640537-52246109

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005622 IEA intracellular
GO:0006888 IEA ER to Golgi vesicle-mediated transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000068831 egfl6 EGF-like-domain, multiple 6 protein_coding Danio_rerio
ENSDARG00000097660 trappc2 trafficking protein particle complex 2 protein_coding Danio_rerio
ENSG00000196459 TRAPPC2 trafficking protein particle complex 2 protein_coding Homo_sapiens
ENSG00000256060 TRAPPC2P1 trafficking protein particle complex 2B protein_coding Homo_sapiens

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