C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 0610009B22 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000007921 0610009B22Rik-001 ENSMUSG00000007777 10090 - 11:51685386-51688653 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000007921
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000007921 14.517±2.78 7.975±1.52 17.429±3.24 15.678±7.01 8.922±2.61 8.235±2.01 11.276±1.70 20.448±2.18 15.947±1.71 6.700±0.48 18.643±1.62 8.040±7.21 12.085±4.81 22.197±6.77

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089W CIL_00089W_0002 VISTA 11:51640537-52246109

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005622 IEA intracellular
GO:0006888 IEA ER to Golgi vesicle-mediated transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000099693 egfl6-202 protein_coding Danio_rerio 0 281
ENSDART00000150082 trappc2-001 protein_coding Danio_rerio 3.00018e-42 176
ENST00000359680 TRAPPC2-201 protein_coding Homo_sapiens 0 516
ENST00000380578 TRAPPC2-001 retained_intron Homo_sapiens 0 366
ENST00000380579 TRAPPC2-002 protein_coding Homo_sapiens 0 516
ENST00000458511 TRAPPC2-005 protein_coding Homo_sapiens 0 514
ENST00000517553 TRAPPC2-007 retained_intron Homo_sapiens 0 217
ENST00000518847 TRAPPC2-008 protein_coding Homo_sapiens 0 311
ENST00000519382 TRAPPC2-004 retained_intron Homo_sapiens 0 322
ENST00000519885 TRAPPC2-006 protein_coding Homo_sapiens 0 366
ENST00000543226 TRAPPC2P1-002 protein_coding Homo_sapiens 0 497
ENST00000596755 TRAPPC2P1-003 protein_coding Homo_sapiens 0 497

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