C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: calcium regulated heat stable protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000008393 Carhsp1 10090 - 16:8658587-8672153 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000008537 Carhsp1-201 8658587-8672153 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000008537
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000008537 70.480±14.62 243.030±54.35 23.891±1.86 44.877±27.14 67.910±13.29 108.950±4.85 11.398±1.93 29.005±1.74 56.863±19.83 60.179±8.78 2.935±0.75 142.124±49.72 28.830±8.91 25.155±13.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000EW CIL_0000EW_0002 CGP 16:8637674-8672153
CIL_0000EV CIL_0000EV_0002 CGP 16:8658587-8792308

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000177 IDA cytoplasmic exosome (RNase complex)
GO:0003677 IEA DNA binding
GO:0003730 ISS mRNA 3'-UTR binding
GO:0005515 IPI protein binding
GO:0005829 IDA cytosol
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0043186 IDA P granule
GO:0043488 IMP regulation of mRNA stability

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000053129 carhsp1 calcium regulated heat stable protein 1 protein_coding Danio_rerio
ENSG00000153048 CARHSP1 calcium regulated heat stable protein 1, 24kDa protein_coding Homo_sapiens

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