C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: dynein light chain LC8-type 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000009013 Dynll1 10090 - 5:115297110-115300999 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000009157 Dynll1-001 115297110-115300999 protein_coding
  ENSMUST00000112090 Dynll1-003 115298505-115300912 protein_coding
  ENSMUST00000123292 Dynll1-005 115298431-115299435 processed_transcript
  ENSMUST00000125959 Dynll1-002 115300276-115300934 retained_intron
  ENSMUST00000127552 Dynll1-004 115299556-115300879 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000009157ENSMUST00000112090ENSMUST00000123292ENSMUST00000125959
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000009157 14.167±6.32 4.363±1.68 34.297±9.16 36.969±26.35 6.744±2.39 15.252±3.06 4.397±0.62 7.198±1.48 25.081±25.06 22.023±1.31 1.298±0.26 17.918±4.11 21.485±8.32 66.089±7.44
ENSMUST00000112090 25.693±8.17 10.096±1.68 121.139±29.32 93.609±29.16 30.539±11.93 10.942±1.68 10.587±3.55 15.511±3.60 42.198±43.43 17.415±3.95 11.792±3.51 33.548±37.00 112.302±70.71 86.529±28.75
ENSMUST00000123292 N/A N/A N/A N/A 12.638±0.00 N/A N/A N/A N/A N/A 8.650±2.48 115.268±1.10 101.307±77.92 N/A
ENSMUST00000125959 62.859±33.19 13.527±1.33 144.623±16.50 110.056±22.85 50.669±11.77 138.017±33.52 15.033±2.99 33.520±3.54 18.841±22.26 112.598±8.15 N/A 89.779±24.04 158.924±33.68 174.093±20.31

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZA CIL_0007ZA_0002 VISTA 5:114966986-115567561
CIL_0009CQ CIL_0009CQ_0002 VISTA 5:115188390-115791906

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000776 ISS kinetochore
GO:0003774 IEA motor activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005739 IEA mitochondrion
GO:0005813 IEA centrosome
GO:0005829 IDA cytosol
GO:0005856 IDA cytoskeleton
GO:0005868 ISS cytoplasmic dynein complex
GO:0005874 IEA microtubule
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006810 IEA transport
GO:0006915 IEA apoptotic process
GO:0007018 TAS microtubule-based movement
GO:0008022 IPI protein C-terminus binding
GO:0008180 IEA COP9 signalosome
GO:0016020 IDA membrane
GO:0019899 IEA enzyme binding
GO:0019904 IPI protein domain specific binding
GO:0021762 IEA substantia nigra development
GO:0030235 IEA nitric-oxide synthase regulator activity
GO:0042326 IEA negative regulation of phosphorylation
GO:0042803 IEA protein homodimerization activity
GO:0050790 IEA regulation of catalytic activity
GO:0070062 IEA extracellular vesicular exosome
GO:0072686 ISS mitotic spindle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058454 dynll1 dynein, light chain, LC8-type 1 protein_coding Danio_rerio
ENSG00000088986 DYNLL1 dynein, light chain, LC8-type 1 protein_coding Homo_sapiens

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