C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: dynein light chain LC8-type 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000009157 Dynll1-001 ENSMUSG00000009013 10090 - 5:115297110-115300999 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000009157
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000009157 14.167±6.32 4.363±1.68 34.297±9.16 36.969±26.35 6.744±2.39 15.252±3.06 4.397±0.62 7.198±1.48 25.081±25.06 22.023±1.31 1.298±0.26 17.918±4.11 21.485±8.32 66.089±7.44

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZA CIL_0007ZA_0002 VISTA 5:114966986-115567561
CIL_0009CQ CIL_0009CQ_0002 VISTA 5:115188390-115791906

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000776 ISS kinetochore
GO:0003774 IEA motor activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005739 IEA mitochondrion
GO:0005813 IEA centrosome
GO:0005829 IDA cytosol
GO:0005856 IDA cytoskeleton
GO:0005868 ISS cytoplasmic dynein complex
GO:0005874 IEA microtubule
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006810 IEA transport
GO:0006915 IEA apoptotic process
GO:0007018 TAS microtubule-based movement
GO:0008022 IPI protein C-terminus binding
GO:0008180 IEA COP9 signalosome
GO:0016020 IDA membrane
GO:0019899 IEA enzyme binding
GO:0019904 IPI protein domain specific binding
GO:0021762 IEA substantia nigra development
GO:0030235 IEA nitric-oxide synthase regulator activity
GO:0042326 IEA negative regulation of phosphorylation
GO:0042803 IEA protein homodimerization activity
GO:0050790 IEA regulation of catalytic activity
GO:0070062 IEA extracellular vesicular exosome
GO:0072686 ISS mitotic spindle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000242577 DYNLL1-001 protein_coding Homo_sapiens 0 797
ENST00000392508 DYNLL1-003 protein_coding Homo_sapiens 0 706
ENST00000392509 DYNLL1-006 protein_coding Homo_sapiens 0 680
ENST00000429273 DYNLL1P7-001 processed_pseudogene Homo_sapiens 0 302
ENST00000467158 DYNLL1P5-001 processed_pseudogene Homo_sapiens 5e-40 167
ENST00000548214 DYNLL1-007 protein_coding Homo_sapiens 0 303
ENST00000548342 DYNLL1-004 protein_coding Homo_sapiens 0 451
ENST00000549649 DYNLL1-005 protein_coding Homo_sapiens 0 195
ENST00000549989 DYNLL1-008 protein_coding Homo_sapiens 0 590
ENST00000550178 DYNLL1-010 protein_coding Homo_sapiens 0 213
ENST00000550845 DYNLL1-002 protein_coding Homo_sapiens 0 213
ENST00000552316 DYNLL1-011 processed_transcript Homo_sapiens 0 477
ENST00000552870 DYNLL1-009 protein_coding Homo_sapiens 0 411
ENST00000554807 DYNLL1P2-001 processed_pseudogene Homo_sapiens 0 322
ENST00000595442 DYNLL1P1-001 processed_pseudogene Homo_sapiens 0 337
ENST00000596113 DYNLL1P3-001 processed_pseudogene Homo_sapiens 0 292

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