C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: adaptor protein complex AP-1, beta 1 subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000009234 Ap1b1-201 ENSMUSG00000009090 10090 + 11:4986824-5042791 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000009234
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000009234 22.964±7.98 30.937±2.72 24.744±1.48 29.561±3.35 26.189±9.78 36.662±14.61 13.559±1.36 33.663±10.26 22.389±10.80 29.111±1.88 5.973±0.71 20.032±8.31 27.335±10.15 7.182±3.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003VQ CIL_0003VQ_0002 CGP 11:4986824-5065327

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005802 TAS trans-Golgi network
GO:0006886 TAS intracellular protein transport
GO:0008565 IEA protein transporter activity
GO:0016192 TAS vesicle-mediated transport
GO:0019901 IPI protein kinase binding
GO:0030131 IEA clathrin adaptor complex
GO:0031410 IEA cytoplasmic vesicle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000137128 ap1b1-001 protein_coding Danio_rerio 0 1753
ENSDART00000022518 ap1b1-201 protein_coding Danio_rerio 0 1749
ENSDART00000050916 ap2b1-201 protein_coding Danio_rerio 0 1585
ENSDART00000134387 ap2b1-001 protein_coding Danio_rerio 0 1585
ENST00000317368 AP1B1-002 protein_coding Homo_sapiens 0 2865
ENST00000357586 AP1B1-201 protein_coding Homo_sapiens 0 3723
ENST00000402502 AP1B1-004 protein_coding Homo_sapiens 0 3674
ENST00000405198 AP1B1-001 protein_coding Homo_sapiens 0 3618
ENST00000415447 AP1B1-202 protein_coding Homo_sapiens 0 3644
ENST00000415756 AP1B1-008 protein_coding Homo_sapiens 0 425
ENST00000416196 AP1B1P2-001 unprocessed_pseudogene Homo_sapiens 4.99997e-41 169
ENST00000421126 AP1B1-003 protein_coding Homo_sapiens 0 2337
ENST00000432560 AP1B1-203 protein_coding Homo_sapiens 0 3779
ENST00000439655 AC000041.8-001 unprocessed_pseudogene Homo_sapiens 0 263
ENST00000441188 RP13-88F20.1-001 processed_pseudogene Homo_sapiens 0 1016
ENST00000473606 AP1B1-006 retained_intron Homo_sapiens 0 505
ENST00000482818 AP1B1-005 retained_intron Homo_sapiens 0 601
ENST00000588116 AP2B1-017 nonsense_mediated_decay Homo_sapiens 0 425
ENST00000610402 AP2B1-022 protein_coding Homo_sapiens 0 1356
ENST00000612035 AP2B1-005 protein_coding Homo_sapiens 0 1356
ENST00000612116 AP2B1-006 protein_coding Homo_sapiens 0 1356
ENST00000614600 AP2B1-007 protein_coding Homo_sapiens 0 1356
ENST00000616681 AP2B1-021 protein_coding Homo_sapiens 0 1038
ENST00000616784 AP2B1-001 protein_coding Homo_sapiens 0 1356
ENST00000618940 AP2B1-201 protein_coding Homo_sapiens 0 1356
ENST00000619183 AP2B1-008 processed_transcript Homo_sapiens 0 972
ENST00000620039 AP2B1-020 nonsense_mediated_decay Homo_sapiens 0 1266
ENST00000621668 AP2B1-004 protein_coding Homo_sapiens 0 1038
ENST00000621914 AP2B1-019 protein_coding Homo_sapiens 0 1356

Loading