C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RNA (guanine-7-) methyltransferase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000009535 Rnmt 10090 + 18:68300355-68324852 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000009679 Rnmt-001 68300355-68324852 protein_coding
  ENSMUST00000025427 Rnmt-002 68300400-68321906 protein_coding
  ENSMUST00000129849 Rnmt-007 68304997-68306194 protein_coding
  ENSMUST00000131075 Rnmt-005 68300392-68309417 protein_coding
  ENSMUST00000139111 Rnmt-006 68300422-68311682 protein_coding
  ENSMUST00000139554 Rnmt-008 68317491-68319244 retained_intron
  ENSMUST00000148937 Rnmt-004 68318997-68324851 processed_transcript
  ENSMUST00000151833 Rnmt-003 68300398-68315450 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000009679ENSMUST00000025427ENSMUST00000139111ENSMUST00000148937ENSMUST00000151833
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000009679 1.387±0.64 0.669±0.00 3.069±0.81 6.503±0.48 0.887±0.20 0.674±0.04 0.410±0.00 0.578±0.14 1.896±1.49 0.766±0.07 3.231±0.40 1.875±0.85 2.010±0.54 0.751±0.23
ENSMUST00000025427 2.796±0.68 1.743±0.00 5.947±0.00 9.833±0.11 2.808±1.37 1.929±0.54 2.651±0.00 2.668±0.40 7.457±5.91 3.130±0.33 5.088±0.58 3.291±1.90 11.132±1.68 4.192±0.69
ENSMUST00000139111 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.602±0.00 23.025±0.00 17.894±0.00
ENSMUST00000148937 0.922±0.36 2.934±0.43 1.092±0.00 4.023±0.56 1.559±1.00 1.134±0.69 0.667±0.00 0.698±0.23 0.457±0.19 N/A N/A 1.790±0.90 N/A N/A
ENSMUST00000151833 1.442±0.00 1.519±0.38 N/A N/A 1.124±0.00 0.657±0.10 N/A N/A N/A 1.387±0.00 N/A 2.310±0.73 1.502±0.17 0.898±0.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007Z8 CIL_0007Z8_0002 VISTA 18:67758776-68359713
CIL_0002FK CIL_0002FK_0003 CGP 18:68260187-68324852
CIL_0002FJ CIL_0002FJ_0003 CGP 18:68300355-68339711

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003723 ISS RNA binding
GO:0004482 ISS mRNA (guanine-N7-)-methyltransferase activity
GO:0005515 IEA protein binding
GO:0005634 ISS nucleus
GO:0005730 IEA nucleolus
GO:0005845 ISS mRNA cap binding complex
GO:0006370 ISS 7-methylguanosine mRNA capping
GO:0036265 IEA RNA (guanine-N7)-methylation
GO:0043235 ISO receptor complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070553 rnmt RNA (guanine-7-) methyltransferase protein_coding Danio_rerio
ENSG00000101654 RNMT RNA (guanine-7-) methyltransferase protein_coding Homo_sapiens

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