C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RNA (guanine-7-) methyltransferase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000009679 Rnmt-001 ENSMUSG00000009535 10090 + 18:68300355-68324852 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000009679
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000009679 1.387±0.64 0.669±0.00 3.069±0.81 6.503±0.48 0.887±0.20 0.674±0.04 0.410±0.00 0.578±0.14 1.896±1.49 0.766±0.07 3.231±0.40 1.875±0.85 2.010±0.54 0.751±0.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007Z8 CIL_0007Z8_0002 VISTA 18:67758776-68359713
CIL_0002FK CIL_0002FK_0003 CGP 18:68260187-68324852
CIL_0002FJ CIL_0002FJ_0003 CGP 18:68300355-68339711

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 ISS RNA binding
GO:0004482 ISS mRNA (guanine-N7-)-methyltransferase activity
GO:0005515 IEA protein binding
GO:0005634 ISS nucleus
GO:0005730 IEA nucleolus
GO:0005845 ISS mRNA cap binding complex
GO:0006370 ISS 7-methylguanosine mRNA capping
GO:0036265 IEA RNA (guanine-N7)-methylation
GO:0043235 ISO receptor complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262173 RNMT-201 protein_coding Homo_sapiens 0 1216
ENST00000383314 RNMT-001 protein_coding Homo_sapiens 0 1216
ENST00000543302 RNMT-003 protein_coding Homo_sapiens 0 1216
ENST00000588417 RNMT-008 retained_intron Homo_sapiens 0 353
ENST00000588457 RNMT-004 nonsense_mediated_decay Homo_sapiens 0 1219
ENST00000589866 RNMT-007 protein_coding Homo_sapiens 0 1216
ENST00000592764 RNMT-005 protein_coding Homo_sapiens 0 1157

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