C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RNA (guanine-7-) methyltransferase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000101654 RNMT 9606 + 18:13726660-13764558 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000262173 RNMT-201 13731474-13764555 protein_coding
  ENST00000383314 RNMT-001 13726661-13764558 protein_coding
  ENST00000543302 RNMT-003 13726660-13760285 protein_coding
  ENST00000588417 RNMT-008 13741620-13743074 retained_intron
  ENST00000588457 RNMT-004 13726667-13762344 nonsense_mediated_decay
  ENST00000589866 RNMT-007 13730438-13760067 protein_coding
  ENST00000591746 RNMT-006 13726769-13731821 protein_coding
  ENST00000591922 RNMT-010 13762301-13764555 processed_transcript
  ENST00000592764 RNMT-005 13726704-13764556 protein_coding
  ENST00000593007 RNMT-009 13746273-13762627 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000262173ENST00000383314ENST00000543302ENST00000589866ENST00000592764
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000262173 N/A 2.714±0.00 N/A 1.400±0.00 0.922±0.33 2.993±2.47 1.790±0.83 1.056±0.12 0.924±0.00 N/A 3.932±1.09 2.581±0.76 4.298±1.07
ENST00000383314 N/A N/A 4.481±2.99 2.632±0.00 1.072±0.00 N/A N/A 2.348±0.00 N/A 0.747±0.00 4.534±0.00 N/A N/A
ENST00000543302 N/A N/A N/A N/A N/A N/A N/A 2.994±0.00 4.788±0.00 N/A 2.931±0.00 N/A N/A
ENST00000589866 N/A N/A N/A 4.319±0.00 1.247±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592764 2.069±0.00 N/A N/A 1.520±0.00 1.565±0.00 N/A 1.712±0.00 1.563±0.00 2.152±0.00 N/A 3.154±1.04 2.081±1.14 4.216±0.68

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005Q2 CIL_0005Q2_0002 CGP 18:13217498-13726663
CIL_0002FK CIL_0002FK_0002 CGP 18:13663347-13764558
CIL_0002FJ CIL_0002FJ_0002 CGP 18:13726660-13826743

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003723 IMP RNA binding
GO:0004482 IEA:IDA mRNA (guanine-N7-)-methyltransferase activity
GO:0005515 IPI protein binding
GO:0005634 IEA:IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005730 IDA nucleolus
GO:0005845 IDA mRNA cap binding complex
GO:0006366 TAS transcription from RNA polymerase II promoter
GO:0006370 IEA:IMP 7-methylguanosine mRNA capping
GO:0008152 IEA metabolic process
GO:0008168 IEA methyltransferase activity
GO:0010467 TAS gene expression
GO:0016032 TAS viral process
GO:0036265 IEA RNA (guanine-N7)-methylation
GO:0043235 IDA receptor complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070553 rnmt RNA (guanine-7-) methyltransferase protein_coding Danio_rerio
ENSMUSG00000009535 Rnmt RNA (guanine-7-) methyltransferase protein_coding Mus_musculus

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