C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002FJ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000070553-ENSDARG00000031348 CGP 7955 19:13271886-13425534
GeneTranscriptPositionBiotype
ENSDARG00000031348 (mc5ra)
melanocortin 5a receptor 		ENSDART00000040073 (mc5ra-201) 13424066-13425200 protein_coding
ENSDART00000139909 (mc5ra-001) 13385013-13425534 protein_coding
ENSDARG00000070553 (rnmt)
RNA (guanine-7-) methyltransferase 		ENSDART00000088917 (rnmt-001) 13271886-13303856 protein_coding
ENSDART00000103675 (rnmt-201) 13271981-13303855 protein_coding
CIL_0002FJ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000101654-ENSG00000176136 CGP 9606 18:13726660-13826743
GeneTranscriptPositionBiotype
ENSG00000101654 (RNMT)
RNA (guanine-7-) methyltransferase 		ENST00000262173 (RNMT-201) 13731474-13764555 protein_coding
ENST00000383314 (RNMT-001) 13726661-13764558 protein_coding
ENST00000543302 (RNMT-003) 13726660-13760285 protein_coding
ENST00000588417 (RNMT-008) 13741620-13743074 retained_intron
ENST00000588457 (RNMT-004) 13726667-13762344 nonsense_mediated_decay
ENST00000589866 (RNMT-007) 13730438-13760067 protein_coding
ENST00000591746 (RNMT-006) 13726769-13731821 protein_coding
ENST00000591922 (RNMT-010) 13762301-13764555 processed_transcript
ENST00000592764 (RNMT-005) 13726704-13764556 protein_coding
ENST00000593007 (RNMT-009) 13746273-13762627 protein_coding
ENSG00000176136 (MC5R)
melanocortin 5 receptor 		ENST00000324750 (MC5R-001) 13825544-13826743 protein_coding
ENST00000589410 (MC5R-002) 13824155-13826284 protein_coding
ENSG00000177150 (FAM210A)
family with sequence similarity 210, member A 		ENST00000322247 (FAM210A-001) 13663347-13726560 protein_coding
ENST00000402563 (FAM210A-201) 13663351-13726592 protein_coding
ENST00000585785 (FAM210A-002) 13665883-13726592 processed_transcript
ENST00000588475 (FAM210A-003) 13666003-13726505 processed_transcript
ENST00000589346 (FAM210A-006) 13666231-13671939 protein_coding
ENST00000591269 (FAM210A-004) 13671912-13726663 protein_coding
ENST00000592976 (FAM210A-005) 13666494-13726586 protein_coding
CIL_0002FJ_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000009535-ENSMUSG00000007480 CGP 10090 18:68300355-68339711
GeneTranscriptPositionBiotype
ENSMUSG00000007480 (Mc5r)
melanocortin 5 receptor 		ENSMUST00000172148 (Mc5r-201) 68337603-68339711 protein_coding
ENSMUSG00000009535 (Rnmt)
RNA (guanine-7-) methyltransferase 		ENSMUST00000009679 (Rnmt-001) 68300355-68324852 protein_coding
ENSMUST00000025427 (Rnmt-002) 68300400-68321906 protein_coding
ENSMUST00000129849 (Rnmt-007) 68304997-68306194 protein_coding
ENSMUST00000131075 (Rnmt-005) 68300392-68309417 protein_coding
ENSMUST00000139111 (Rnmt-006) 68300422-68311682 protein_coding
ENSMUST00000139554 (Rnmt-008) 68317491-68319244 retained_intron
ENSMUST00000148937 (Rnmt-004) 68318997-68324851 processed_transcript
ENSMUST00000151833 (Rnmt-003) 68300398-68315450 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002FJ_0001ENSDARG00000031348ENSDART00000040073ENSDART00000139909ENSDARG00000070553ENSDART00000088917ENSDART00000103675CIL_0002FJ_0002ENSG00000101654ENST00000262173ENST00000383314ENST00000543302ENST00000588417ENST00000588457ENST00000589866ENST00000591746ENST00000591922ENST00000592764ENST00000593007ENSG00000176136ENST00000324750ENST00000589410ENSG00000177150ENST00000322247ENST00000402563ENST00000585785ENST00000588475ENST00000589346ENST00000591269ENST00000592976CIL_0002FJ_0003ENSMUSG00000007480ENSMUST00000172148ENSMUSG00000009535ENSMUST00000009679ENSMUST00000025427ENSMUST00000129849ENSMUST00000131075ENSMUST00000139111ENSMUST00000139554ENSMUST00000148937ENSMUST00000151833
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002FJ_0001ENSDARG00000031348ENSDART00000040073ENSDART00000139909ENSDARG00000070553ENSDART00000088917ENSDART00000103675CIL_0002FJ_0002ENSG00000101654ENST00000262173ENST00000383314ENST00000543302ENST00000589866ENST00000592764ENSG00000176136ENST00000324750ENST00000589410ENSG00000177150ENST00000322247ENST00000402563ENST00000592976CIL_0002FJ_0003ENSMUSG00000007480ENSMUST00000172148ENSMUSG00000009535ENSMUST00000009679ENSMUST00000025427ENSMUST00000139111ENSMUST00000148937ENSMUST00000151833
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000031348 ENSDART00000040073 N/A N/A N/A 5.014±1.09 N/A N/A N/A N/A 0.084±0.00 N/A N/A N/A N/A N/A
ENSDART00000139909 N/A N/A N/A 2.276±0.00 N/A N/A N/A 0.086±0.00 N/A N/A 0.471±0.00 N/A N/A N/A
ENSDARG00000070553 ENSDART00000088917 N/A N/A N/A 12.321±1.69 N/A N/A 9.556±1.53 6.963±5.00 1.248±0.00 N/A 2.315±0.00 N/A N/A N/A
ENSDART00000103675 N/A N/A N/A N/A N/A N/A 3.542±1.75 6.199±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000101654 ENST00000262173 N/A 2.714±0.00 N/A N/A 1.400±0.00 0.922±0.33 2.993±2.47 1.790±0.83 1.056±0.12 0.924±0.00 N/A 3.932±1.09 2.581±0.76 4.298±1.07
ENST00000383314 N/A N/A N/A 4.481±2.99 2.632±0.00 1.072±0.00 N/A N/A 2.348±0.00 N/A 0.747±0.00 4.534±0.00 N/A N/A
ENST00000543302 N/A N/A N/A N/A N/A N/A N/A N/A 2.994±0.00 4.788±0.00 N/A 2.931±0.00 N/A N/A
ENST00000588417 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588457 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589866 N/A N/A N/A N/A 4.319±0.00 1.247±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591746 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591922 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592764 2.069±0.00 N/A N/A N/A 1.520±0.00 1.565±0.00 N/A 1.712±0.00 1.563±0.00 2.152±0.00 N/A 3.154±1.04 2.081±1.14 4.216±0.68
ENST00000593007 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000176136 ENST00000324750 0.028±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.052±0.00 0.054±0.00 N/A
ENST00000589410 0.054±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.067±0.00 N/A N/A
ENSG00000177150 ENST00000322247 N/A N/A N/A N/A 0.939±0.00 N/A N/A N/A N/A 0.813±0.00 N/A N/A N/A 1.773±0.00
ENST00000402563 1.364±0.00 2.431±0.00 N/A 1.960±0.00 0.962±0.00 1.292±0.52 4.241±2.91 2.099±0.95 1.611±0.17 N/A 2.057±0.51 2.114±0.29 1.711±0.12 1.856±0.00
ENST00000585785 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588475 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589346 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591269 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592976 N/A N/A 1.732±0.00 N/A N/A 4.329±0.00 3.528±0.00 N/A N/A N/A 3.116±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000007480 ENSMUST00000172148 1.750±0.79 1.011±0.36 0.835±0.00 0.234±0.15 1.947±0.43 0.088±0.03 0.064±0.05 0.236±0.08 0.137±0.07 0.440±0.11 1.747±0.26 0.346±0.20 0.020±0.00 0.080±0.03
ENSMUSG00000009535 ENSMUST00000009679 1.387±0.64 0.669±0.00 3.069±0.81 6.503±0.48 0.887±0.20 0.674±0.04 0.410±0.00 0.578±0.14 1.896±1.49 0.766±0.07 3.231±0.40 1.875±0.85 2.010±0.54 0.751±0.23
ENSMUST00000025427 2.796±0.68 1.743±0.00 5.947±0.00 9.833±0.11 2.808±1.37 1.929±0.54 2.651±0.00 2.668±0.40 7.457±5.91 3.130±0.33 5.088±0.58 3.291±1.90 11.132±1.68 4.192±0.69
ENSMUST00000129849 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131075 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139111 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.602±0.00 23.025±0.00 17.894±0.00
ENSMUST00000139554 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148937 0.922±0.36 2.934±0.43 1.092±0.00 4.023±0.56 1.559±1.00 1.134±0.69 0.667±0.00 0.698±0.23 0.457±0.19 N/A N/A 1.790±0.90 N/A N/A
ENSMUST00000151833 1.442±0.00 1.519±0.38 N/A N/A 1.124±0.00 0.657±0.10 N/A N/A N/A 1.387±0.00 N/A 2.310±0.73 1.502±0.17 0.898±0.13

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