C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: torsin family 2, member A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000009563 Tor2a 10090 + 2:32757234-32762244 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000009707 Tor2a-001 32757234-32762244 protein_coding
  ENSMUST00000123624 Tor2a-004 32757291-32757983 processed_transcript
  ENSMUST00000140999 Tor2a-003 32757319-32761594 protein_coding
  ENSMUST00000149720 Tor2a-007 32757276-32762242 retained_intron
  ENSMUST00000149987 Tor2a-006 32760295-32761789 retained_intron
  ENSMUST00000156617 Tor2a-002 32757255-32761730 nonsense_mediated_decay
  ENSMUST00000175763 Tor2a-009 32757260-32762244 nonsense_mediated_decay
  ENSMUST00000177382 Tor2a-008 32757245-32761939 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000009707ENSMUST00000140999ENSMUST00000149720ENSMUST00000149987ENSMUST00000156617ENSMUST00000175763ENSMUST00000177382
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000009707 22.766±4.20 20.695±1.08 17.496±3.39 15.258±3.78 21.359±8.50 38.209±5.68 5.233±1.85 29.999±4.83 23.001±5.05 22.664±2.63 2.531±0.63 35.140±16.01 48.962±28.55
ENSMUST00000140999 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.354±0.00 10.670±0.00 N/A
ENSMUST00000149720 3.658±0.70 5.092±1.36 3.111±0.53 3.450±2.00 4.925±1.24 4.398±0.30 1.590±0.24 3.306±0.38 3.542±0.00 5.096±1.08 0.486±0.13 8.998±3.61 N/A
ENSMUST00000149987 N/A N/A N/A 2.887±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156617 N/A 7.193±0.93 N/A N/A 9.749±1.40 10.102±0.31 N/A N/A 16.833±7.56 N/A N/A N/A N/A
ENSMUST00000175763 N/A N/A N/A 1.966±0.00 N/A N/A N/A N/A N/A N/A 1.286±0.00 11.782±1.16 9.398±0.00
ENSMUST00000177382 N/A 24.847±3.16 N/A N/A 24.309±0.00 49.961±0.00 N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YA CIL_0008YA_0002 VISTA 2:32608279-33209524
CIL_00075N CIL_00075N_0002 CGP 2:32757026-32775633

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005788 IDA endoplasmic reticulum lumen
GO:0051085 IEA chaperone mediated protein folding requiring cofactor
GO:0051260 IDA protein homooligomerization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000025612 tor2a torsin family 2, member A protein_coding Danio_rerio
ENSG00000160404 TOR2A torsin family 2, member A protein_coding Homo_sapiens

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