C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: torsin family 2, member A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000009707 Tor2a-001 ENSMUSG00000009563 10090 + 2:32757234-32762244 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000009707
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000009707 22.766±4.20 20.695±1.08 17.496±3.39 15.258±3.78 21.359±8.50 38.209±5.68 5.233±1.85 29.999±4.83 23.001±5.05 22.664±2.63 2.531±0.63 35.140±16.01 48.962±28.55

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YA CIL_0008YA_0002 VISTA 2:32608279-33209524
CIL_00075N CIL_00075N_0002 CGP 2:32757026-32775633

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005788 IDA endoplasmic reticulum lumen
GO:0051085 IEA chaperone mediated protein folding requiring cofactor
GO:0051260 IDA protein homooligomerization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000336067 TOR2A-005 protein_coding Homo_sapiens 0 261
ENST00000373281 TOR2A-002 protein_coding Homo_sapiens 0 261
ENST00000373284 TOR2A-006 protein_coding Homo_sapiens 0 1037
ENST00000463256 TOR2A-008 nonsense_mediated_decay Homo_sapiens 0 261
ENST00000463577 TOR2A-004 protein_coding Homo_sapiens 0 261
ENST00000472723 TOR2A-003 retained_intron Homo_sapiens 0 361
ENST00000493439 TOR2A-009 protein_coding Homo_sapiens 7e-24 115
ENST00000494135 TOR2A-001 retained_intron Homo_sapiens 0 361
ENST00000496460 TOR2A-007 nonsense_mediated_decay Homo_sapiens 0 573

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