C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: neural precursor cell expressed, developmentally down-regulated gene 8
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000010376 Nedd8 10090 - 14:55662265-55671906 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000010520 Nedd8-201 55662267-55671906 protein_coding
  ENSMUST00000163750 Nedd8-202 55662265-55671873 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000010520ENSMUST00000163750
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000010520 141.614±25.17 92.005±7.53 194.285±7.58 156.495±97.78 119.345±45.95 82.892±11.37 104.314±6.42 150.597±21.71 156.820±87.27 99.799±15.13 74.986±2.68 111.262±37.27 135.554±91.14 84.367±37.99
ENSMUST00000163750 N/A N/A N/A 73.977±0.00 N/A N/A N/A N/A N/A N/A N/A 93.090±0.00 103.189±38.51 47.896±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00029W CIL_00029W_0002 CGP 14:55657879-55671906
CIL_0002AC CIL_0002AC_0002 CGP 14:55662265-55678750

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0006357 IDA regulation of transcription from RNA polymerase II promoter
GO:0008104 IDA protein localization
GO:0014070 IEA response to organic cyclic compound
GO:0031625 IEA ubiquitin protein ligase binding
GO:0045116 ISS protein neddylation
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007989 nedd8 neural precursor cell expressed, developmentally down-regulated 8 protein_coding Danio_rerio
ENSG00000129559 NEDD8 neural precursor cell expressed, developmentally down-regulated 8 protein_coding Homo_sapiens

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