C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00029W_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000255526-ENSG00000129559 CGP 9606 14:24213955-24232454
GeneTranscriptPositionBiotype
ENSG00000129559 (NEDD8)
neural precursor cell expressed, developmentally down-regulated 8 		ENST00000250495 (NEDD8-001) 24216852-24232454 protein_coding
ENST00000396828 (NEDD8-002) 24216857-24232303 nonsense_mediated_decay
ENST00000524927 (NEDD8-004) 24217716-24232354 protein_coding
ENST00000526430 (NEDD8-007) 24217020-24232331 processed_transcript
ENST00000527046 (NEDD8-005) 24216859-24232002 processed_transcript
ENST00000531430 (NEDD8-006) 24216866-24232325 processed_transcript
ENST00000533242 (NEDD8-003) 24226605-24232355 processed_transcript
ENST00000560427 (NEDD8-008) 24216996-24218726 retained_intron
CIL_00029W_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000002329-ENSMUSG00000010376 CGP 10090 14:55657879-55671906
GeneTranscriptPositionBiotype
ENSMUSG00000002329 (Mdp1)
magnesium-dependent phosphatase 1 		ENSMUST00000002400 (Mdp1-201) 55657879-55660508 protein_coding
ENSMUSG00000010376 (Nedd8)
neural precursor cell expressed, developmentally down-regulated gene 8 		ENSMUST00000010520 (Nedd8-201) 55662267-55671906 protein_coding
ENSMUST00000163750 (Nedd8-202) 55662265-55671873 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00029W_0001ENSG00000129559ENST00000250495ENST00000396828ENST00000524927ENST00000526430ENST00000527046ENST00000531430ENST00000533242ENST00000560427CIL_00029W_0002ENSMUSG00000002329ENSMUST00000002400ENSMUSG00000010376ENSMUST00000010520ENSMUST00000163750
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00029W_0001ENSG00000129559ENST00000250495ENST00000531430CIL_00029W_0002ENSMUSG00000002329ENSMUST00000002400ENSMUSG00000010376ENSMUST00000010520ENSMUST00000163750
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000129559 ENST00000250495 147.769±0.00 367.500±0.00 21.197±0.00 191.596±132.26 106.746±80.09 138.916±0.00 100.481±83.50 233.636±197.10 70.138±53.53 325.983±0.00 40.754±19.57 188.238±141.05 305.196±102.39 235.553±0.00
ENST00000396828 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524927 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526430 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527046 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531430 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 19.866±0.00 N/A N/A N/A
ENST00000533242 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560427 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000002329 ENSMUST00000002400 13.464±1.76 12.902±0.96 15.530±2.58 10.794±4.43 9.339±2.18 18.695±1.11 15.866±1.65 10.250±1.16 6.674±1.87 10.087±0.39 8.625±0.99 10.805±1.45 6.700±1.88 1.806±0.60
ENSMUSG00000010376 ENSMUST00000010520 141.614±25.17 92.005±7.53 194.285±7.58 156.495±97.78 119.345±45.95 82.892±11.37 104.314±6.42 150.597±21.71 156.820±87.27 99.799±15.13 74.986±2.68 111.262±37.27 135.554±91.14 84.367±37.99
ENSMUST00000163750 N/A N/A N/A 73.977±0.00 N/A N/A N/A N/A N/A N/A N/A 93.090±0.00 103.189±38.51 47.896±0.00

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