C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000010803 Gabra1 10090 - 11:42130939-42182930 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000020707 Gabra1-001 42130939-42182930 protein_coding
  ENSMUST00000132971 Gabra1-003 42175984-42182930 protein_coding
  ENSMUST00000153147 Gabra1-002 42162553-42182163 protein_coding
  ENSMUST00000169305 Gabra1-004 42179149-42182459 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020707ENSMUST00000132971ENSMUST00000153147ENSMUST00000169305
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020707 0.011±0.00 0.159±0.04 1.444±0.06 0.023±0.00 N/A 0.098±0.06 0.019±0.01 0.036±0.02 0.016±0.00 0.020±0.01 0.072±0.03 0.015±0.02 0.342±0.02
ENSMUST00000132971 0.123±0.02 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.265±0.05 N/A N/A
ENSMUST00000153147 N/A N/A N/A N/A N/A N/A 0.233±0.00 N/A 0.154±0.00 0.189±0.02 0.171±0.00 N/A N/A
ENSMUST00000169305 N/A N/A N/A 0.134±0.02 0.244±0.00 0.141±0.00 0.071±0.00 N/A 0.138±0.06 N/A 0.331±0.09 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004890 IEA GABA-A receptor activity
GO:0005230 IEA extracellular ligand-gated ion channel activity
GO:0005254 IEA chloride channel activity
GO:0005515 IPI protein binding
GO:0005886 IDA plasma membrane
GO:0005887 IEA integral component of plasma membrane
GO:0007165 IEA signal transduction
GO:0007214 IEA gamma-aminobutyric acid signaling pathway
GO:0008144 IEA drug binding
GO:0016917 IEA GABA receptor activity
GO:0030054 IEA cell junction
GO:0034220 IEA ion transmembrane transport
GO:0034707 IEA chloride channel complex
GO:0045211 IEA postsynaptic membrane
GO:0051932 IEA synaptic transmission, GABAergic
GO:0071420 IEA cellular response to histamine
GO:1902476 IEA chloride transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000068989 gabra1 gamma-aminobutyric acid (GABA) A receptor, alpha 1 protein_coding Danio_rerio
ENSG00000022355 GABRA1 gamma-aminobutyric acid (GABA) A receptor, alpha 1 protein_coding Homo_sapiens

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