C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000020707 Gabra1-001 ENSMUSG00000010803 10090 - 11:42130939-42182930 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020707
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020707 0.011±0.00 0.159±0.04 1.444±0.06 0.023±0.00 0.098±0.06 0.019±0.01 0.036±0.02 0.016±0.00 0.020±0.01 0.072±0.03 0.015±0.02 0.342±0.02

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004890 IEA GABA-A receptor activity
GO:0005230 IEA extracellular ligand-gated ion channel activity
GO:0005254 IEA chloride channel activity
GO:0005515 IPI protein binding
GO:0005886 IDA plasma membrane
GO:0005887 IEA integral component of plasma membrane
GO:0007165 IEA signal transduction
GO:0007214 IEA gamma-aminobutyric acid signaling pathway
GO:0008144 IEA drug binding
GO:0016917 IEA GABA receptor activity
GO:0030054 IEA cell junction
GO:0034220 IEA ion transmembrane transport
GO:0034707 IEA chloride channel complex
GO:0045211 IEA postsynaptic membrane
GO:0051932 IEA synaptic transmission, GABAergic
GO:0071420 IEA cellular response to histamine
GO:1902476 IEA chloride transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000023897 GABRA1-002 protein_coding Homo_sapiens 0 2329
ENST00000393943 GABRA1-005 protein_coding Homo_sapiens 0 2717
ENST00000428797 GABRA1-001 protein_coding Homo_sapiens 0 4002
ENST00000437025 GABRA1-004 protein_coding Homo_sapiens 0 3803
ENST00000519542 GABRA1-009 retained_intron Homo_sapiens 0 763

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