C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: gamma-aminobutyric acid (GABA) A receptor, alpha 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000068989 gabra1 7955 + 21:40675972-40733556 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000100000 gabra1-201 40675972-40733032 protein_coding
  ENSDART00000144767 gabra1-001 40728046-40733556 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyLiverMuscleENSDART00000100000ENSDART00000144767
Transcript ID Brain Kidney Liver Muscle
ENSDART00000100000 25.192±0.00 N/A 0.057±0.00 2.892±0.00
ENSDART00000144767 48.276±0.00 0.876±0.54 N/A 1.063±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00016Q CIL_00016Q_0001 CGP 21:40623673-40733556
CIL_00016P CIL_00016P_0001 CGP 21:40675972-40884038

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004890 IEA GABA-A receptor activity
GO:0005216 IEA ion channel activity
GO:0005230 IEA extracellular ligand-gated ion channel activity
GO:0005886 IEA plasma membrane
GO:0006810 IEA transport
GO:0006811 IEA ion transport
GO:0006821 IEA chloride transport
GO:0007214 IEA gamma-aminobutyric acid signaling pathway
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0030054 IEA cell junction
GO:0045202 IEA synapse
GO:0045211 IEA postsynaptic membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000022355 GABRA1 gamma-aminobutyric acid (GABA) A receptor, alpha 1 protein_coding Homo_sapiens
ENSMUSG00000010803 Gabra1 gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1 protein_coding Mus_musculus

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