C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: latrophilin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000141158 Lphn1-001 ENSMUSG00000013033 10090 + 8:83900105-83941954 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000141158
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000141158 15.092±9.91 20.713±2.65 17.779±0.06 32.927±13.78 5.347±1.95 6.037±1.68 4.687±1.42 5.172±1.47 1.784±1.06 12.386±0.12 2.916±1.23 26.303±9.43 2.119±1.15 8.369±1.37

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004930 IEA G-protein coupled receptor activity
GO:0005886 ISS plasma membrane
GO:0007157 ISS heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0007218 IEA neuropeptide signaling pathway
GO:0016021 IEA integral component of membrane
GO:0016524 ISS latrotoxin receptor activity
GO:0030054 IEA cell junction
GO:0030246 IEA carbohydrate binding
GO:0030424 ISS axon
GO:0030426 ISS growth cone
GO:0035584 ISS calcium-mediated signaling using intracellular calcium source
GO:0042734 ISS presynaptic membrane
GO:0043005 ISS neuron projection
GO:0045202 ISS synapse
GO:0050839 ISS cell adhesion molecule binding
GO:0090129 ISS positive regulation of synapse maturation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000124480 LPHN1 (2 of 2)-201 protein_coding Danio_rerio 0 593
ENSDART00000083358 CABZ01096573.1-201 protein_coding Danio_rerio 0 327
ENST00000319517 LPHN2-004 protein_coding Homo_sapiens 0 283
ENST00000340736 LPHN1-001 protein_coding Homo_sapiens 0 5936
ENST00000359929 LPHN2-001 protein_coding Homo_sapiens 0 283
ENST00000361434 LPHN1-002 protein_coding Homo_sapiens 0 6000
ENST00000370713 LPHN2-003 protein_coding Homo_sapiens 0 283
ENST00000370715 LPHN2-002 protein_coding Homo_sapiens 0 283
ENST00000370717 LPHN2-201 protein_coding Homo_sapiens 0 283
ENST00000370721 LPHN2-005 protein_coding Homo_sapiens 0 283
ENST00000370723 LPHN2-011 protein_coding Homo_sapiens 0 278
ENST00000370725 LPHN2-010 protein_coding Homo_sapiens 0 278
ENST00000370727 LPHN2-009 protein_coding Homo_sapiens 0 278
ENST00000370728 LPHN2-007 protein_coding Homo_sapiens 0 283
ENST00000370730 LPHN2-008 protein_coding Homo_sapiens 0 283
ENST00000449420 LPHN2-012 protein_coding Homo_sapiens 0 278
ENST00000578070 SUZ12P1-005 processed_transcript Homo_sapiens 0 246
ENST00000579526 SUZ12P1-004 processed_transcript Homo_sapiens 0 196
ENST00000589616 LPHN1-004 protein_coding Homo_sapiens 0 289
ENST00000590223 LPHN1-003 retained_intron Homo_sapiens 0 331
ENST00000591528 LPHN1-007 processed_transcript Homo_sapiens 0 595
ENST00000592164 LPHN1-005 protein_coding Homo_sapiens 0 521
ENST00000593005 LPHN1-006 protein_coding Homo_sapiens 0 861

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