C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: latrophilin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000132500 Lphn1-004 ENSMUSG00000013033 10090 + 8:83900735-83939987 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonENSMUST00000132500
Transcript ID Adrenal Colon
ENSMUST00000132500 11.150±3.45 2.633±0.64

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004930 IEA G-protein coupled receptor activity
GO:0005886 IEA plasma membrane
GO:0007218 IEA neuropeptide signaling pathway
GO:0016021 IEA integral component of membrane
GO:0030246 IEA carbohydrate binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000124480 LPHN1 (2 of 2)-201 protein_coding Danio_rerio 0 593
ENSDART00000083358 CABZ01096573.1-201 protein_coding Danio_rerio 0 327
ENST00000319517 LPHN2-004 protein_coding Homo_sapiens 0 283
ENST00000340736 LPHN1-001 protein_coding Homo_sapiens 0 4471
ENST00000359929 LPHN2-001 protein_coding Homo_sapiens 0 283
ENST00000361434 LPHN1-002 protein_coding Homo_sapiens 0 4534
ENST00000370713 LPHN2-003 protein_coding Homo_sapiens 0 283
ENST00000370715 LPHN2-002 protein_coding Homo_sapiens 0 283
ENST00000370717 LPHN2-201 protein_coding Homo_sapiens 0 283
ENST00000370721 LPHN2-005 protein_coding Homo_sapiens 0 283
ENST00000370723 LPHN2-011 protein_coding Homo_sapiens 0 278
ENST00000370725 LPHN2-010 protein_coding Homo_sapiens 0 278
ENST00000370727 LPHN2-009 protein_coding Homo_sapiens 0 278
ENST00000370728 LPHN2-007 protein_coding Homo_sapiens 0 283
ENST00000370730 LPHN2-008 protein_coding Homo_sapiens 0 283
ENST00000449420 LPHN2-012 protein_coding Homo_sapiens 0 278
ENST00000578070 SUZ12P1-005 processed_transcript Homo_sapiens 0 198
ENST00000579526 SUZ12P1-004 processed_transcript Homo_sapiens 0 196
ENST00000589616 LPHN1-004 protein_coding Homo_sapiens 0 289
ENST00000590223 LPHN1-003 retained_intron Homo_sapiens 0 331
ENST00000591528 LPHN1-007 processed_transcript Homo_sapiens 0 595
ENST00000592164 LPHN1-005 protein_coding Homo_sapiens 0 521
ENST00000593005 LPHN1-006 protein_coding Homo_sapiens 0 787

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