C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: clusterin associated protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000014232 Cluap1 10090 + 16:3908801-3941147 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000040881 Cluap1-001 3908825-3941147 protein_coding
  ENSMUST00000124849 Cluap1-003 3909106-3923912 protein_coding
  ENSMUST00000137745 Cluap1-004 3909039-3913572 retained_intron
  ENSMUST00000139294 Cluap1-002 3909076-3929867 nonsense_mediated_decay
  ENSMUST00000145150 Cluap1-005 3908801-3923856 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverMuscleOvaryPlacentaTestisENSMUST00000040881
Transcript ID Bladder Brain Liver Muscle Ovary Placenta Testis
ENSMUST00000040881 16.353±0.85 22.024±10.24 11.004±0.52 5.945±0.22 16.945±0.00 9.287±1.30 41.653±4.51

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005EX CIL_0005EX_0002 CGP 16:3895179-3941147
CIL_0001DL CIL_0001DL_0002 CGP 16:3908801-3976632

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001843 IMP neural tube closure
GO:0001947 IMP heart looping
GO:0003674 ND molecular_function
GO:0005634 IEA nucleus
GO:0005813 IDA centrosome
GO:0005929 IDA cilium
GO:0005930 IDA axoneme
GO:0007224 IMP smoothened signaling pathway
GO:0021508 IMP floor plate formation
GO:0030992 IDA intraciliary transport particle B
GO:0035082 IMP axoneme assembly
GO:0042073 IC intraciliary transport
GO:0042384 IMP cilium assembly
GO:0060972 IMP left/right pattern formation
GO:0097542 IDA ciliary tip
GO:0097546 IDA ciliary base

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079110 cluap1 clusterin associated protein 1 protein_coding Danio_rerio
ENSG00000103351 CLUAP1 clusterin associated protein 1 protein_coding Homo_sapiens

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