C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005EX_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000215131-ENSG00000103351 CGP 9606 16:3493484-3539048
GeneTranscriptPositionBiotype
ENSG00000103351 (CLUAP1)
clusterin associated protein 1 		ENST00000341633 (CLUAP1-002) 3501012-3536559 protein_coding
ENST00000571025 (CLUAP1-003) 3501018-3536825 protein_coding
ENST00000572600 (CLUAP1-004) 3509894-3537669 protein_coding
ENST00000572632 (CLUAP1-011) 3519969-3536470 nonsense_mediated_decay
ENST00000573370 (CLUAP1-005) 3500976-3515551 nonsense_mediated_decay
ENST00000574369 (CLUAP1-007) 3500981-3523229 protein_coding
ENST00000574551 (CLUAP1-010) 3515376-3530590 protein_coding
ENST00000574592 (CLUAP1-006) 3500982-3523196 nonsense_mediated_decay
ENST00000575134 (CLUAP1-008) 3501007-3530609 nonsense_mediated_decay
ENST00000575323 (CLUAP1-012) 3530462-3533111 retained_intron
ENST00000576117 (CLUAP1-009) 3502044-3508464 protein_coding
ENST00000576634 (CLUAP1-001) 3500924-3539048 protein_coding
ENSG00000215131 (C16orf90)
chromosome 16 open reading frame 90 		ENST00000399645 (C16orf90-001) 3493484-3495480 protein_coding
ENST00000437192 (C16orf90-002) 3493484-3495424 protein_coding
ENSG00000240311 (LA16c-306E5.1)
 ENST00000459875 (LA16c-306E5.1-001) 3496201-3496768 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0005EX_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000005983-ENSMUSG00000014232 CGP 10090 16:3895179-3941147
GeneTranscriptPositionBiotype
ENSMUSG00000005982 (Naa60)
N(alpha)-acetyltransferase 60, NatF catalytic subunit 		ENSMUST00000006138 (Naa60-010) 3884683-3904770 nonsense_mediated_decay
ENSMUST00000115860 (Naa60-002) 3884769-3904769 nonsense_mediated_decay
ENSMUST00000135093 (Naa60-003) 3884668-3897348 nonsense_mediated_decay
ENSMUST00000140832 (Naa60-008) 3884713-3900400 retained_intron
ENSMUST00000143537 (Naa60-006) 3884683-3903749 nonsense_mediated_decay
ENSMUST00000147949 (Naa60-004) 3884686-3897379 nonsense_mediated_decay
ENSMUST00000150655 (Naa60-001) 3894375-3902376 protein_coding
ENSMUST00000151988 (Naa60-009) 3872375-3900811 protein_coding
ENSMUST00000175809 (Naa60-007) 3894375-3901814 protein_coding
ENSMUST00000176224 (Naa60-005) 3894375-3901939 protein_coding
ENSMUST00000176625 (Naa60-011) 3884659-3902048 protein_coding
ENSMUST00000186375 (Naa60-201) 3884619-3904780 protein_coding
ENSMUSG00000005983 (1700037C18Rik)
RIKEN cDNA 1700037C18 gene 		ENSMUST00000006139 (1700037C18Rik-002) 3895181-3907757 nonsense_mediated_decay
ENSMUST00000115859 (1700037C18Rik-001) 3904303-3908689 protein_coding
ENSMUST00000123235 (1700037C18Rik-003) 3907013-3908623 protein_coding
ENSMUST00000177221 (1700037C18Rik-006) 3906258-3907651 protein_coding
ENSMUST00000177323 (1700037C18Rik-005) 3905798-3907702 protein_coding
ENSMUST00000177519 (1700037C18Rik-004) 3895179-3908653 processed_transcript
ENSMUSG00000014232 (Cluap1)
clusterin associated protein 1 		ENSMUST00000040881 (Cluap1-001) 3908825-3941147 protein_coding
ENSMUST00000124849 (Cluap1-003) 3909106-3923912 protein_coding
ENSMUST00000137745 (Cluap1-004) 3909039-3913572 retained_intron
ENSMUST00000139294 (Cluap1-002) 3909076-3929867 nonsense_mediated_decay
ENSMUST00000145150 (Cluap1-005) 3908801-3923856 protein_coding
ENSMUSG00000080485 (Gm23493)
predicted gene, 23493 		ENSMUST00000116835 (Gm23493-201) 3927200-3927287 miRNA
ENSMUSG00000083579 (Gm15538)
predicted gene 15538 		ENSMUST00000121410 (Gm15538-001) 3926428-3926740 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005EX_0001ENSG00000103351ENST00000341633ENST00000571025ENST00000572600ENST00000572632ENST00000573370ENST00000574369ENST00000574551ENST00000574592ENST00000575134ENST00000575323ENST00000576117ENST00000576634ENSG00000215131ENST00000399645ENST00000437192ENSG00000240311ENST00000459875CIL_0005EX_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005EX_0001ENSG00000103351ENST00000341633ENST00000572600ENST00000572632ENST00000574369ENST00000574592ENST00000576634ENSG00000215131ENST00000399645ENST00000437192ENSG00000240311ENST00000459875CIL_0005EX_0002ENSMUSG00000005982ENSMUST00000006138ENSMUST00000115860ENSMUST00000143537ENSMUST00000186375ENSMUSG00000005983ENSMUST00000006139ENSMUST00000115859ENSMUST00000177323ENSMUSG00000014232ENSMUST00000040881ENSMUSG00000080485ENSMUST00000116835ENSMUSG00000083579ENSMUST00000121410
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000103351 ENST00000341633 N/A N/A N/A 11.609±3.76 N/A N/A N/A N/A N/A N/A N/A 8.199±0.00 N/A 40.074±7.97
ENST00000571025 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572600 N/A N/A 3.346±0.00 N/A N/A N/A N/A N/A 4.761±0.00 N/A 3.332±0.00 N/A 5.223±0.00 N/A
ENST00000572632 N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.828±0.00 N/A N/A N/A N/A
ENST00000573370 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574369 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.077±0.00 135.898±0.00
ENST00000574551 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574592 N/A N/A N/A N/A N/A N/A N/A 4.907±0.00 N/A N/A N/A N/A N/A N/A
ENST00000575134 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575323 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576117 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576634 3.170±0.00 5.618±0.00 N/A 2.244±0.00 1.898±0.00 5.240±0.59 1.746±0.73 N/A 2.959±0.00 3.110±1.15 0.916±0.00 5.198±1.55 N/A N/A
ENSG00000215131 ENST00000399645 0.034±0.00 0.018±0.00 N/A N/A N/A 0.019±0.00 0.189±0.00 N/A N/A N/A N/A N/A N/A 7.476±0.00
ENST00000437192 0.034±0.00 0.018±0.00 N/A N/A N/A 0.019±0.00 N/A N/A N/A N/A N/A N/A N/A 3.832±0.00
ENSG00000240311 ENST00000459875 0.090±0.00 0.194±0.00 N/A N/A N/A 0.388±0.00 0.047±0.00 N/A 0.046±0.00 N/A 0.088±0.00 0.224±0.00 N/A 2.660±0.64
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000005982 ENSMUST00000006138 21.491±4.37 39.728±5.55 18.945±1.12 16.493±5.93 20.043±2.71 13.202±2.30 14.152±1.69 21.968±2.70 21.257±10.44 19.035±2.23 13.443±1.51 17.575±4.46 13.667±5.91 N/A
ENSMUST00000115860 N/A N/A N/A 15.774±0.00 12.030±0.00 N/A N/A N/A N/A N/A N/A 25.652±0.76 7.425±0.00 N/A
ENSMUST00000135093 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140832 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143537 N/A 29.198±2.23 N/A 29.860±0.00 11.340±0.00 N/A N/A N/A 11.394±0.47 N/A N/A N/A 16.643±0.00 N/A
ENSMUST00000147949 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150655 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151988 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000175809 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176224 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176625 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186375 8.503±1.03 18.948±3.42 N/A 15.193±4.34 14.049±1.60 14.837±2.06 N/A 7.164±1.43 7.093±1.13 10.169±1.71 5.824±0.00 14.225±5.22 N/A N/A
ENSMUSG00000005983 ENSMUST00000006139 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 136.315±20.53
ENSMUST00000115859 8.720±1.72 N/A 8.690±0.62 N/A 8.004±0.71 6.722±0.66 6.566±0.30 10.591±1.57 5.956±1.44 8.876±1.43 4.559±0.51 7.229±0.88 8.048±0.00 N/A
ENSMUST00000123235 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000177221 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000177323 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 94.993±17.05
ENSMUST00000177519 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000014232 ENSMUST00000040881 N/A N/A 16.353±0.85 22.024±10.24 N/A N/A N/A N/A 11.004±0.52 N/A 5.945±0.22 16.945±0.00 9.287±1.30 41.653±4.51
ENSMUST00000124849 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137745 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139294 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145150 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000080485 ENSMUST00000116835 N/A N/A N/A 73.908±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000083579 ENSMUST00000121410 N/A N/A 0.832±0.23 2.466±0.67 0.952±0.00 0.530±0.00 N/A N/A 0.535±0.26 0.305±0.00 0.336±0.13 2.566±0.87 0.689±0.27 1.167±1.33

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