C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: clusterin associated protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000040881 Cluap1-001 ENSMUSG00000014232 10090 + 16:3908825-3941147 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverMuscleOvaryPlacentaTestisENSMUST00000040881
Transcript ID Bladder Brain Liver Muscle Ovary Placenta Testis
ENSMUST00000040881 16.353±0.85 22.024±10.24 11.004±0.52 5.945±0.22 16.945±0.00 9.287±1.30 41.653±4.51

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005EX CIL_0005EX_0002 CGP 16:3895179-3941147
CIL_0001DL CIL_0001DL_0002 CGP 16:3908801-3976632

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001843 IMP neural tube closure
GO:0001947 IMP heart looping
GO:0003674 ND molecular_function
GO:0005634 IEA nucleus
GO:0005813 IDA centrosome
GO:0005929 IDA cilium
GO:0005930 IDA axoneme
GO:0007224 IMP smoothened signaling pathway
GO:0021508 IMP floor plate formation
GO:0030992 IDA intraciliary transport particle B
GO:0035082 IMP axoneme assembly
GO:0042073 IC intraciliary transport
GO:0042384 IMP cilium assembly
GO:0060972 IMP left/right pattern formation
GO:0097542 IDA ciliary tip
GO:0097546 IDA ciliary base

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000341633 CLUAP1-002 protein_coding Homo_sapiens 0 1234
ENST00000571025 CLUAP1-003 protein_coding Homo_sapiens 0 1234
ENST00000572600 CLUAP1-004 protein_coding Homo_sapiens 0 815
ENST00000572632 CLUAP1-011 nonsense_mediated_decay Homo_sapiens 0 198
ENST00000573370 CLUAP1-005 nonsense_mediated_decay Homo_sapiens 0 228
ENST00000574369 CLUAP1-007 protein_coding Homo_sapiens 0 455
ENST00000574551 CLUAP1-010 protein_coding Homo_sapiens 0 479
ENST00000574592 CLUAP1-006 nonsense_mediated_decay Homo_sapiens 0 752
ENST00000575134 CLUAP1-008 nonsense_mediated_decay Homo_sapiens 0 619
ENST00000576117 CLUAP1-009 protein_coding Homo_sapiens 0 457
ENST00000576634 CLUAP1-001 protein_coding Homo_sapiens 0 1469

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