C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001DL_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000103351-ENSG00000167984 CGP 9606 16:3500924-3577400
GeneTranscriptPositionBiotype
ENSG00000103351 (CLUAP1)
clusterin associated protein 1 		ENST00000341633 (CLUAP1-002) 3501012-3536559 protein_coding
ENST00000571025 (CLUAP1-003) 3501018-3536825 protein_coding
ENST00000572600 (CLUAP1-004) 3509894-3537669 protein_coding
ENST00000572632 (CLUAP1-011) 3519969-3536470 nonsense_mediated_decay
ENST00000573370 (CLUAP1-005) 3500976-3515551 nonsense_mediated_decay
ENST00000574369 (CLUAP1-007) 3500981-3523229 protein_coding
ENST00000574551 (CLUAP1-010) 3515376-3530590 protein_coding
ENST00000574592 (CLUAP1-006) 3500982-3523196 nonsense_mediated_decay
ENST00000575134 (CLUAP1-008) 3501007-3530609 nonsense_mediated_decay
ENST00000575323 (CLUAP1-012) 3530462-3533111 retained_intron
ENST00000576117 (CLUAP1-009) 3502044-3508464 protein_coding
ENST00000576634 (CLUAP1-001) 3500924-3539048 protein_coding
CIL_0001DL_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000014232-ENSMUSG00000049871 CGP 10090 16:3908801-3976632
GeneTranscriptPositionBiotype
ENSMUSG00000014232 (Cluap1)
clusterin associated protein 1 		ENSMUST00000040881 (Cluap1-001) 3908825-3941147 protein_coding
ENSMUST00000124849 (Cluap1-003) 3909106-3923912 protein_coding
ENSMUST00000137745 (Cluap1-004) 3909039-3913572 retained_intron
ENSMUST00000139294 (Cluap1-002) 3909076-3929867 nonsense_mediated_decay
ENSMUST00000145150 (Cluap1-005) 3908801-3923856 protein_coding
ENSMUSG00000049871 (Nlrc3)
NLR family, CARD domain containing 3 		ENSMUST00000096308 (Nlrc3-002) 3948870-3976632 retained_intron
ENSMUST00000163478 (Nlrc3-003) 3948879-3964207 retained_intron
ENSMUST00000177551 (Nlrc3-004) 3945610-3976632 protein_coding
ENSMUST00000180200 (Nlrc3-001) 3945007-3976545 protein_coding
ENSMUSG00000080485 (Gm23493)
predicted gene, 23493 		ENSMUST00000116835 (Gm23493-201) 3927200-3927287 miRNA
ENSMUSG00000083579 (Gm15538)
predicted gene 15538 		ENSMUST00000121410 (Gm15538-001) 3926428-3926740 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001DL_0001ENSG00000103351ENST00000341633ENST00000571025ENST00000572600ENST00000572632ENST00000573370ENST00000574369ENST00000574551ENST00000574592ENST00000575134ENST00000575323ENST00000576117ENST00000576634CIL_0001DL_0002ENSMUSG00000014232ENSMUST00000040881ENSMUST00000124849ENSMUST00000137745ENSMUST00000139294ENSMUST00000145150ENSMUSG00000049871ENSMUST00000096308ENSMUST00000163478ENSMUST00000177551ENSMUST00000180200ENSMUSG00000080485ENSMUST00000116835ENSMUSG00000083579ENSMUST00000121410
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001DL_0001ENSG00000103351ENST00000341633ENST00000572600ENST00000572632ENST00000574369ENST00000574592ENST00000576634CIL_0001DL_0002ENSMUSG00000014232ENSMUST00000040881ENSMUSG00000049871ENSMUST00000096308ENSMUST00000163478ENSMUST00000177551ENSMUST00000180200ENSMUSG00000080485ENSMUST00000116835ENSMUSG00000083579ENSMUST00000121410
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000103351 ENST00000341633 N/A N/A N/A 11.609±3.76 N/A N/A N/A N/A N/A N/A N/A 8.199±0.00 N/A 40.074±7.97
ENST00000571025 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572600 N/A N/A 3.346±0.00 N/A N/A N/A N/A N/A 4.761±0.00 N/A 3.332±0.00 N/A 5.223±0.00 N/A
ENST00000572632 N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.828±0.00 N/A N/A N/A N/A
ENST00000573370 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574369 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.077±0.00 135.898±0.00
ENST00000574551 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574592 N/A N/A N/A N/A N/A N/A N/A 4.907±0.00 N/A N/A N/A N/A N/A N/A
ENST00000575134 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575323 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576117 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576634 3.170±0.00 5.618±0.00 N/A 2.244±0.00 1.898±0.00 5.240±0.59 1.746±0.73 N/A 2.959±0.00 3.110±1.15 0.916±0.00 5.198±1.55 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000014232 ENSMUST00000040881 N/A N/A 16.353±0.85 22.024±10.24 N/A N/A N/A N/A 11.004±0.52 N/A 5.945±0.22 16.945±0.00 9.287±1.30 41.653±4.51
ENSMUST00000124849 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137745 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139294 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145150 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000049871 ENSMUST00000096308 N/A N/A N/A N/A 1.228±0.00 N/A N/A N/A 0.075±0.00 N/A N/A 0.450±0.12 0.115±0.00 N/A
ENSMUST00000163478 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.299±0.07 0.373±0.18 N/A
ENSMUST00000177551 0.302±0.15 0.854±0.14 0.130±0.00 0.248±0.01 4.162±1.29 0.402±0.15 0.281±0.07 0.447±0.09 0.105±0.05 0.738±0.19 0.242±0.10 0.464±0.18 0.476±0.50 0.099±0.02
ENSMUST00000180200 0.237±0.06 3.254±1.41 0.173±0.00 0.785±0.03 3.064±1.68 0.678±0.00 0.383±0.22 0.378±0.09 0.208±0.14 0.557±0.06 0.862±0.37 3.084±1.93 0.777±0.26 0.388±0.25
ENSMUSG00000080485 ENSMUST00000116835 N/A N/A N/A 73.908±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000083579 ENSMUST00000121410 N/A N/A 0.832±0.23 2.466±0.67 0.952±0.00 0.530±0.00 N/A N/A 0.535±0.26 0.305±0.00 0.336±0.13 2.566±0.87 0.689±0.27 1.167±1.33

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