C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: calmodulin binding transcription activator 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000014592 Camta1 10090 - 4:150917322-151861876 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000049790 Camta1-001 151059526-151861746 protein_coding
  ENSMUST00000097774 Camta1-002 151059525-151861876 protein_coding
  ENSMUST00000105668 Camta1-012 151059814-151129495 protein_coding
  ENSMUST00000105670 Camta1-006 151059814-151108576 protein_coding
  ENSMUST00000131948 Camta1-009 151086124-151108303 protein_coding
  ENSMUST00000135780 Camta1-004 151792230-151861738 processed_transcript
  ENSMUST00000140030 Camta1-007 151059526-151079793 protein_coding
  ENSMUST00000143434 Camta1-010 151086039-151139584 processed_transcript
  ENSMUST00000153938 Camta1-013 151780453-151861704 nonsense_mediated_decay
  ENSMUST00000155685 Camta1-005 151470176-151861650 processed_transcript
  ENSMUST00000169423 Camta1-201 150917322-151861669 protein_coding
  ENSMUST00000185034 Camta1-003 151790574-151861704 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000049790ENSMUST00000097774ENSMUST00000105668ENSMUST00000105670ENSMUST00000135780ENSMUST00000140030ENSMUST00000153938ENSMUST00000169423ENSMUST00000185034
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000049790 N/A N/A N/A 5.372±0.00 N/A 0.236±0.01 1.319±0.18 0.195±0.01 0.030±0.00 0.263±0.00 0.286±0.01 0.658±0.13 0.158±0.00 N/A
ENSMUST00000097774 0.363±0.00 N/A 0.204±0.00 N/A N/A 0.208±0.00 N/A N/A N/A 0.257±0.00 0.331±0.02 0.639±0.00 0.128±0.00 0.885±0.00
ENSMUST00000105668 N/A 0.554±0.00 N/A 14.099±6.55 N/A 0.577±0.03 N/A 0.426±0.00 N/A N/A N/A N/A N/A N/A
ENSMUST00000105670 N/A N/A N/A 11.531±3.02 0.615±0.14 1.109±0.45 5.739±0.83 0.432±0.00 N/A 0.997±0.15 0.651±0.19 3.531±0.87 0.503±0.18 N/A
ENSMUST00000135780 N/A N/A 4.391±0.00 N/A N/A N/A N/A N/A 0.923±0.10 N/A 11.868±1.42 N/A N/A N/A
ENSMUST00000140030 N/A N/A N/A 10.051±2.44 N/A N/A 3.818±0.31 N/A N/A N/A 0.733±0.11 2.595±0.97 0.480±0.10 N/A
ENSMUST00000153938 3.353±1.35 7.688±0.80 3.097±0.23 N/A 5.415±2.29 3.716±0.80 N/A 3.961±0.86 1.656±0.63 5.372±1.00 1.384±0.17 8.473±0.97 1.102±0.18 4.848±0.20
ENSMUST00000169423 N/A 0.273±0.00 N/A N/A N/A 0.231±0.00 N/A N/A N/A N/A N/A 1.014±0.00 N/A N/A
ENSMUST00000185034 N/A N/A 0.673±0.00 N/A 0.779±0.00 N/A N/A 0.799±0.00 0.384±0.11 N/A 1.493±0.24 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VW CIL_0007VW_0002 VISTA 4:150524120-151125978

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007824 CR847998.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000077428 camta1a calmodulin binding transcription activator 1a protein_coding Danio_rerio
ENSG00000171735 CAMTA1 calmodulin binding transcription activator 1 protein_coding Homo_sapiens

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