C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calmodulin binding transcription activator 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000153938 Camta1-013 ENSMUSG00000014592 10090 - 4:151780453-151861704 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000153938
Transcript ID Adipose Adrenal Bladder Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000153938 3.353±1.35 7.688±0.80 3.097±0.23 5.415±2.29 3.716±0.80 3.961±0.86 1.656±0.63 5.372±1.00 1.384±0.17 8.473±0.97 1.102±0.18 4.848±0.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VW CIL_0007VW_0002 VISTA 4:150524120-151125978

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000303635 CAMTA1-001 protein_coding Homo_sapiens 0 492
ENST00000461311 CAMTA1-005 nonsense_mediated_decay Homo_sapiens 0 540
ENST00000461580 CAMTA1-007 processed_transcript Homo_sapiens 1e-35 154
ENST00000467267 CAMTA1-011 processed_transcript Homo_sapiens 1e-19 100
ENST00000467404 CAMTA1-003 protein_coding Homo_sapiens 0 374
ENST00000470648 CAMTA1-006 processed_transcript Homo_sapiens 1e-35 154
ENST00000472283 CAMTA1-008 processed_transcript Homo_sapiens 6e-36 154
ENST00000473578 CAMTA1-010 protein_coding Homo_sapiens 0 643
ENST00000476163 CAMTA1-002 processed_transcript Homo_sapiens 0 374
ENST00000482934 CAMTA1-012 nonsense_mediated_decay Homo_sapiens 6.02558e-44 182
ENST00000486138 CAMTA1-004 nonsense_mediated_decay Homo_sapiens 0 503
ENST00000490738 CAMTA1-009 processed_transcript Homo_sapiens 0 374
ENST00000557126 CAMTA1-016 protein_coding Homo_sapiens 0 492

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