C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calmodulin binding transcription activator 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000049790 Camta1-001 ENSMUSG00000014592 10090 - 4:151059526-151861746 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000049790
Transcript ID Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000049790 5.372±0.00 0.236±0.01 1.319±0.18 0.195±0.01 0.030±0.00 0.263±0.00 0.286±0.01 0.658±0.13 0.158±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VW CIL_0007VW_0002 VISTA 4:150524120-151125978

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000046059 camta1a-201 protein_coding Danio_rerio 0 597
ENSDART00000146633 camta1a-001 protein_coding Danio_rerio 0 597
ENSDART00000046663 CR847998.1-201 protein_coding Danio_rerio 0 379
ENST00000303635 CAMTA1-001 protein_coding Homo_sapiens 0 7107
ENST00000461311 CAMTA1-005 nonsense_mediated_decay Homo_sapiens 0 388
ENST00000467404 CAMTA1-003 protein_coding Homo_sapiens 0 222
ENST00000473578 CAMTA1-010 protein_coding Homo_sapiens 0 521
ENST00000476163 CAMTA1-002 processed_transcript Homo_sapiens 0 222
ENST00000476864 CAMTA1-015 protein_coding Homo_sapiens 0 610
ENST00000482934 CAMTA1-012 nonsense_mediated_decay Homo_sapiens 1.96182e-44 183
ENST00000486138 CAMTA1-004 nonsense_mediated_decay Homo_sapiens 0 351
ENST00000490738 CAMTA1-009 processed_transcript Homo_sapiens 0 228
ENST00000490905 CAMTA1-013 protein_coding Homo_sapiens 0 920
ENST00000495233 CAMTA1-014 protein_coding Homo_sapiens 0 2213
ENST00000557126 CAMTA1-016 protein_coding Homo_sapiens 0 503

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