C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: surfeit gene 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000014873 Surf2 10090 + 2:26916367-26920183 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000015017 Surf2-001 26916367-26920183 protein_coding
  ENSMUST00000125408 Surf2-005 26916669-26919821 processed_transcript
  ENSMUST00000126947 Surf2-002 26916381-26920172 processed_transcript
  ENSMUST00000135506 Surf2-006 26916669-26920166 retained_intron
  ENSMUST00000143098 Surf2-004 26917428-26919835 processed_transcript
  ENSMUST00000157066 Surf2-003 26916813-26919953 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverENSMUST00000015017ENSMUST00000143098
Transcript ID Brain Liver
ENSMUST00000015017 30.249±0.00 36.100±2.24
ENSMUST00000143098 54.960±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006DK CIL_0006DK_0002 CGP 2:26910764-26916530
CIL_0006DJ CIL_0006DJ_0002 CGP 2:26913383-26920183
CIL_0006DE CIL_0006DE_0002 CGP 2:26916367-26933928

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 IEA nucleus
GO:0005730 IEA nucleolus
GO:0005886 IEA plasma membrane
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000037182 SURF2 surfeit 2 protein_coding Danio_rerio
ENSG00000148291 SURF2 surfeit 2 protein_coding Homo_sapiens

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